RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 Q9H8V8 135 aa5.96□□□□□ -1.45
PTPRD-204ENST00000397606 TRAV8-3A0A0A6YYJ7 113 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 LINC00269Q8N2A0 174 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
PTPRD-204ENST00000397606 UBE2D3P61077 147 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 UBE2D2P62837 147 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 ODF1Q14990 250 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 MPV17L2Q567V2 206 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 TTC32Q5I0X7 151 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 SPATA12Q7Z6I5 190 aa5.96□□□□□ -1.46
PTPRD-204ENST00000397606 BOD1L1Q8NFC6 3051 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 PRSS47A8MTI9 375 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 CELSR3Q9NYQ7 3312 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 LOC100131303A0A0U1RQF7 123 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 CXCL5P42830 114 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 NUPR2A6NF83 97 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 C11orf86A6NJI1 115 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 TSHBP01222 138 aa5.95□□□□□ -1.46
PTPRD-204ENST00000397606 SIVA1O15304 175 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 Q6ZTC4 211 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 IGLV4-3A0A075B6K6 122 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 H3BUT2 72 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 NDUFA1O15239 70 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 SPAG11BQ08648 103 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 ATMQ13315 3056 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 RBX1P62877 108 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 CR1P17927 2039 aa5.94□□□□□ -1.46
PTPRD-204ENST00000397606 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 NPSP0C0P6 89 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 FHL2Q14192 279 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 MAST4O15021 2626 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 RBMY1FQ15415 496 aaKnown RBP5.93□□□□□ -1.46
PTPRD-204ENST00000397606 TAL2Q16559 108 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 C14orf177Q52M58 125 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 C11orf72Q8NBR9 251 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 MRPL52Q86TS9 123 aaKnown RBP5.93□□□□□ -1.46
PTPRD-204ENST00000397606 BOD1L2Q8IYS8 172 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 Q8N976 141 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 E9PLD3 99 aa5.93□□□□□ -1.46
PTPRD-204ENST00000397606 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 IGHV1-58A0A0C4DH39 117 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 TEP1Q99973 2627 aaKnown RBP5.92□□□□□ -1.46
PTPRD-204ENST00000397606 GAS8-AS1O95177 125 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-204ENST00000397606 AGRNO00468 2067 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 MIAQ16674 131 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 ANKRD39Q53RE8 183 aa5.92□□□□□ -1.46
PTPRD-204ENST00000397606 MAP1AP78559 2803 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-204ENST00000397606 ZFAND6Q6FIF0 208 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 PCP2Q8IVA1 136 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 EDA2RQ9HAV5 297 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 CHCHD7Q9BUK0 85 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 IFITM1P13164 125 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 LURAP1LQ8IV03 231 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 MRPS36P82909 103 aaKnown RBP5.91□□□□□ -1.46
PTPRD-204ENST00000397606 SAMD5Q5TGI4 173 aa5.91□□□□□ -1.46
PTPRD-204ENST00000397606 Q6ZVH6 145 aa5.9□□□□□ -1.46
PTPRD-204ENST00000397606 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
PTPRD-204ENST00000397606 NFE4Q86UQ8 179 aa5.9□□□□□ -1.46
PTPRD-204ENST00000397606 UBE2D4Q9Y2X8 147 aa5.9□□□□□ -1.46
PTPRD-204ENST00000397606 TIRAPP58753 221 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 RPL18AQ02543 176 aaKnown RBP5.9□□□□□ -1.47
PTPRD-204ENST00000397606 RNF151Q2KHN1 245 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 PGPEP1Q9NXJ5 209 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 C21orf62-AS1Q17RA5 79 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 VPS25Q9BRG1 176 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 X6R8D5 127 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 COL12A1Q99715 3063 aa5.9□□□□□ -1.47
PTPRD-204ENST00000397606 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
PTPRD-204ENST00000397606 KALRNO60229 2985 aa5.89□□□□□ -1.47
PTPRD-204ENST00000397606 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
PTPRD-204ENST00000397606 A8MTW9 85 aa5.89□□□□□ -1.47
PTPRD-204ENST00000397606 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
PTPRD-204ENST00000397606 CEND1Q8N111 149 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 CD164L2Q6UWJ8 174 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 SPEGQ15772 3267 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-204ENST00000397606 ATXN8Q156A1 80 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 GAGE2EQ4V326 116 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 GAGE2DQ9UEU5 116 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 PRO1854Q9UHT4 67 aa5.88□□□□□ -1.47
PTPRD-204ENST00000397606 MGAM2Q2M2H8 2515 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 C12orf74Q32Q52 190 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 Q6ZSN1 163 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 CDC42SE2Q9NRR3 84 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 CELA1Q9UNI1 258 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 GCN1Q92616 2671 aaKnown RBP5.87□□□□□ -1.47
PTPRD-204ENST00000397606 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 K7ERU9 68 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 UBE2BP63146 152 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 IGLV2-18A0A075B6J9 118 aa5.87□□□□□ -1.47
PTPRD-204ENST00000397606 LINC00959A0A1B0GUT2 108 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms