RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 Q6ZRP5 223 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 AQP10Q96PS8 301 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 MARVELD1Q9BSK0 173 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 LINC00474Q9P2X8 69 aa5.81□□□□□ -1.48
NEDD9-203ENST00000397378 A0A096LNI7 61 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 TGIF2-C20orf24A0A0A6YYL0 155 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 CTXND1A0A1B0GTU2 59 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 SSNA1O43805 119 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 MT-ND4LP03901 98 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 ZNF726P1Q15940 193 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 PYY3Q5JQD4 70 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 C10orf91Q5T1B1 145 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 EIF5AL1Q6IS14 154 aaKnown RBP5.8□□□□□ -1.48
NEDD9-203ENST00000397378 LINC01551Q86U37 167 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
NEDD9-203ENST00000397378 CARHSP1Q9Y2V2 147 aaKnown RBP5.8□□□□□ -1.48
NEDD9-203ENST00000397378 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-203ENST00000397378 M0QY20 66 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 SULT1A2P50226 295 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 PEA15Q15121 130 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 TMEM241Q24JQ0 296 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 AKR1C8PQ5T2L2 129 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 PGLYRP4Q96LB8 373 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 SMCO4Q9NRQ5 59 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 PKIGQ9Y2B9 76 aa5.79□□□□□ -1.48
NEDD9-203ENST00000397378 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 SMLR1H3BR10 107 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 TSPAN13O95857 204 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 HERV-K104P63124 156 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 INO80EQ8NBZ0 244 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-203ENST00000397378 SNHG12Q9BXW3 62 aa5.78□□□□□ -1.48
NEDD9-203ENST00000397378 MUC21A0A140T8X8 626 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 PTTG1IPP53801 180 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 CACNG7P62955 275 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 UBE2V1Q13404 147 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 COL5A1-AS1Q5SY13 56 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 ZNF664Q8N3J9 261 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 MED28Q9H204 178 aa5.77□□□□□ -1.49
NEDD9-203ENST00000397378 LCE2BO14633 110 aa5.76□□□□□ -1.49
NEDD9-203ENST00000397378 UBE2L6O14933 153 aa5.76□□□□□ -1.49
NEDD9-203ENST00000397378 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
NEDD9-203ENST00000397378 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
NEDD9-203ENST00000397378 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
NEDD9-203ENST00000397378 COLCA2A8K830 154 aa5.75□□□□□ -1.49
NEDD9-203ENST00000397378 MGPP08493 103 aa5.75□□□□□ -1.49
NEDD9-203ENST00000397378 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
NEDD9-203ENST00000397378 OCIAD2Q56VL3 154 aa5.75□□□□□ -1.49
NEDD9-203ENST00000397378 RASL11AQ6T310 242 aa5.75□□□□□ -1.49
NEDD9-203ENST00000397378 CHCHD10Q8WYQ3 142 aaPredicted RBP5.75□□□□□ -1.49
NEDD9-203ENST00000397378 BORCS7-ASMTA0A0B4J1R7 106 aa5.74□□□□□ -1.49
NEDD9-203ENST00000397378 MAP1LC3B2A6NCE7 125 aa5.74□□□□□ -1.49
NEDD9-203ENST00000397378 AMTP48728 403 aa5.74□□□□□ -1.49
NEDD9-203ENST00000397378 JOSD1Q15040 202 aaPredicted RBP5.74□□□□□ -1.49
NEDD9-203ENST00000397378 RPL7L1Q6DKI1 246 aaKnown RBP5.74□□□□□ -1.49
NEDD9-203ENST00000397378 MAP1LC3BQ9GZQ8 125 aa5.74□□□□□ -1.49
NEDD9-203ENST00000397378 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 FOXI1Q12951 378 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 BAGE2Q86Y30 109 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 BOD1L2Q8IYS8 172 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 PRR26Q8N8Z3 221 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 CARD19Q96LW7 228 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 SEC11CQ9BY50 192 aa5.73□□□□□ -1.49
NEDD9-203ENST00000397378 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
NEDD9-203ENST00000397378 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
NEDD9-203ENST00000397378 IGLC6P0CF74 106 aa5.72□□□□□ -1.49
NEDD9-203ENST00000397378 TMUB2Q71RG4 321 aa5.72□□□□□ -1.49
NEDD9-203ENST00000397378 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
NEDD9-203ENST00000397378 H7C423 109 aa5.71□□□□□ -1.5
NEDD9-203ENST00000397378 PAGE4O60829 102 aa5.71□□□□□ -1.5
NEDD9-203ENST00000397378 FER1L6-AS1Q8NA97 138 aa5.71□□□□□ -1.5
NEDD9-203ENST00000397378 ISOC2Q96AB3 205 aa5.71□□□□□ -1.5
NEDD9-203ENST00000397378 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 TNFRSF6BO95407 300 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 MT-ND6P03923 174 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 TRGC1P0CF51 173 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 CKS1BP61024 79 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
NEDD9-203ENST00000397378 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 AMMECR1LQ6DCA0 310 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 OR5A1Q8NGJ0 315 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 DIRC1Q969H9 104 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 LINC00526Q96FQ7 95 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 CST9LQ9H4G1 147 aa5.7□□□□□ -1.5
NEDD9-203ENST00000397378 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 F2Z2F3 143 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 PPP1R2P9O14990 202 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 CCL25O15444 150 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 PDE6DO43924 150 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 NCR2O95944 276 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 NTF3P20783 257 aa5.69□□□□□ -1.5
NEDD9-203ENST00000397378 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
NEDD9-203ENST00000397378 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 LINC00959A0A1B0GUT2 108 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 FGF6P10767 208 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms