RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 U3KQK5 164 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 BRWD1-AS2P59051 145 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 FAM110AQ9BQ89 295 aa4.08□□□□□ -1.76
VPS13C-204ENST00000395898 SS18L2Q9UHA2 77 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 IGKV2-24A0A0C4DH68 120 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 CDKN2A-AS1Q9UH64 79 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 TRBV6-5A0A0K0K1A5 114 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 INAFM1C9JVW0 142 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 HIGD2AQ9BW72 106 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 CASC2Q6XLA1 102 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 UQCRQO14949 82 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 Q6ZPA2 131 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 WISP2O76076 250 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 CRIP1P50238 77 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 C7orf33Q8WU49 177 aa4.07□□□□□ -1.76
VPS13C-204ENST00000395898 C19orf84I3L1E1 186 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 PCNTO95613 3336 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 NDUFC1O43677 76 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 C20orf173Q96LM9 149 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 TRAV23DV6A0A075B6W5 121 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 USP17L23D6RBM5 183 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 A0A087WZ39 114 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 WFDC11Q8NEX6 87 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 GDF5OSQ5U4N7 250 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 TRAV10A0A0B4J240 114 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 ZNF295-AS1Q8N0V1 137 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 LRRK2Q5S007 2527 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 TEX49A0A1B0GTD5 131 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 CD164L2Q6UWJ8 174 aa4.06□□□□□ -1.76
VPS13C-204ENST00000395898 NOTCH2Q04721 2471 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 Q6ZSV7 163 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 MBD6Q96DN6 1003 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 MRGPRG-AS1Q2M3A8 158 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 MRPS36P82909 103 aaKnown RBP4.05□□□□□ -1.76
VPS13C-204ENST00000395898 ZNF706Q9Y5V0 76 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-204ENST00000395898 CRIP3Q6Q6R5 217 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 C22orf34Q6ZV56 151 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 ZNF22P17026 224 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-204ENST00000395898 LELP1Q5T871 98 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 KLLNB2CW77 178 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
VPS13C-204ENST00000395898 RNF185Q96GF1 192 aa4.05□□□□□ -1.76
VPS13C-204ENST00000395898 COL27A1Q8IZC6 1860 aaPredicted RBP4.05□□□□□ -1.76
VPS13C-204ENST00000395898 ATP5EP56381 51 aaPredicted RBP4.04□□□□□ -1.76
VPS13C-204ENST00000395898 C1orf229Q6ZS94 237 aaPredicted RBP4.04□□□□□ -1.76
VPS13C-204ENST00000395898 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 NRACQ8N912 160 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 RNASE8Q8TDE3 154 aaKnown RBP4.04□□□□□ -1.76
VPS13C-204ENST00000395898 CNFNQ9BYD5 112 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 PRO3102Q9H379 93 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 DCANP1Q8TF63 244 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 DHRS4-AS1Q9P1J3 65 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 TP73-AS1Q9UF72 201 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 IGLV4-69A0A075B6H9 119 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 Q8N6K4 173 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 ZNF702PQ9H963 129 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 CCDC168Q8NDH2 2452 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 TRIAP1O43715 76 aa4.04□□□□□ -1.76
VPS13C-204ENST00000395898 RNASE3P12724 160 aaKnown RBP4.04□□□□□ -1.76
VPS13C-204ENST00000395898 K7ERS5 55 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 UBE2D4Q9Y2X8 147 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 V9GYY9 64 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 IGLV1-40P01703 118 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 IGLV2-11P01706 119 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 CCKP06307 115 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 KPRPQ5T749 579 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-204ENST00000395898 PTH2Q96A98 100 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 MYO9AB2RTY4 2548 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 PRB2P02812 416 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-204ENST00000395898 SDIM1Q6ZPB5 146 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 LINC01006Q8NI28 216 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 C6orf99Q4VX62 202 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 ZFYVE26Q68DK2 2539 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 M0R378 163 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 LY6G6DO95868 133 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
VPS13C-204ENST00000395898 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
VPS13C-204ENST00000395898 RBX1P62877 108 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 Q8N976 141 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 PCSK5Q92824 1860 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 XAGE1AQ9HD64 81 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 UBE2D1P51668 147 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 BBC3Q96PG8 261 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-204ENST00000395898 TSHBP01222 138 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-204ENST00000395898 C9orf85Q96MD7 179 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 ENHOQ6UWT2 76 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 C1orf158Q8N1D5 194 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 YPEL4Q96NS1 127 aa4.02□□□□□ -1.77
VPS13C-204ENST00000395898 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-204ENST00000395898 LINC00482Q8N8I6 264 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms