RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RNF152Q8N8N0 203 aa11.5□□□□□ -0.57
SMARCD1-202ENST00000394963 K7EQD1 137 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 CEND1Q8N111 149 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 IGLV1-51P01701 117 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
SMARCD1-202ENST00000394963 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 TMEM243Q9BU79 118 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 H3BMG7 143 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 XCL1P47992 114 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 PRIMA1Q86XR5 153 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 PFN2P35080 140 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
SMARCD1-202ENST00000394963 RHOHQ15669 191 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 C9orf66Q5T8R8 295 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 PAX4O43316 350 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 KRTAP10-3P60369 221 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 H3BRM9 83 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 POM121L12Q8N7R1 296 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 C16orf74Q96GX8 76 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 CDKN2A-AS1Q9UH64 79 aa11.47□□□□□ -0.57
SMARCD1-202ENST00000394963 C12orf74Q32Q52 190 aa11.46□□□□□ -0.58
SMARCD1-202ENST00000394963 IGIPA6NJ69 53 aa11.45□□□□□ -0.58
SMARCD1-202ENST00000394963 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
SMARCD1-202ENST00000394963 A0A1B0GV72 72 aa11.45□□□□□ -0.58
SMARCD1-202ENST00000394963 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
SMARCD1-202ENST00000394963 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 A0A1B0GWB2 263 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 E9PLD3 99 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 LINC00158P58513 81 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 RETNQ9HD89 108 aa11.44□□□□□ -0.58
SMARCD1-202ENST00000394963 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 FHL3Q13643 280 aa11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 Q9H8V8 135 aa11.43□□□□□ -0.58
SMARCD1-202ENST00000394963 TSPEAR-AS2P59090 65 aa11.42□□□□□ -0.58
SMARCD1-202ENST00000394963 NXPH4O95158 308 aa11.42□□□□□ -0.58
SMARCD1-202ENST00000394963 ZNF22P17026 224 aaPredicted RBP11.42□□□□□ -0.58
SMARCD1-202ENST00000394963 RNASE8Q8TDE3 154 aaKnown RBP11.42□□□□□ -0.58
SMARCD1-202ENST00000394963 TRAV26-1A0A087WT03 109 aa11.41□□□□□ -0.58
SMARCD1-202ENST00000394963 A4D1N5 150 aa11.41□□□□□ -0.58
SMARCD1-202ENST00000394963 A0A1W2PPM0 123 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 VSIG2Q96IQ7 327 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 ETDBQ3ZM63 59 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 TRBV6-5A0A0K0K1A5 114 aa11.4□□□□□ -0.58
SMARCD1-202ENST00000394963 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 RS1O15537 224 aa11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 MALP21145 153 aa11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 APOC4P55056 127 aa11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 C16orf95Q9H693 158 aa11.39□□□□□ -0.59
SMARCD1-202ENST00000394963 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
SMARCD1-202ENST00000394963 ZMAT4Q9H898 229 aa11.38□□□□□ -0.59
SMARCD1-202ENST00000394963 SH2D6Q7Z4S9 175 aa11.38□□□□□ -0.59
SMARCD1-202ENST00000394963 SIVA1O15304 175 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 K7ERU9 68 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 IGHV3-30P01768 117 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 IGHV3-30-5P0DP03 117 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
SMARCD1-202ENST00000394963 SPANXA1Q9NS26 97 aa11.36□□□□□ -0.59
SMARCD1-202ENST00000394963 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
SMARCD1-202ENST00000394963 IGLL5B9A064 214 aa11.36□□□□□ -0.59
SMARCD1-202ENST00000394963 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
SMARCD1-202ENST00000394963 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
SMARCD1-202ENST00000394963 COX6A2Q02221 97 aa11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 DAZ2Q13117 558 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 CHCHD7Q9BUK0 85 aa11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
SMARCD1-202ENST00000394963 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
SMARCD1-202ENST00000394963 LEPROTO15243 131 aa11.34□□□□□ -0.59
SMARCD1-202ENST00000394963 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.59
SMARCD1-202ENST00000394963 WFDC2Q14508 124 aa11.33□□□□□ -0.6
SMARCD1-202ENST00000394963 IGLV4-60A0A075B6I1 120 aa11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 NFE4Q86UQ8 179 aa11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 PTH2Q96A98 100 aa11.32□□□□□ -0.6
SMARCD1-202ENST00000394963 K7EP34 96 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 CKS1BP61024 79 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 UBE2WQ96B02 151 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 HERVK_113P63121 156 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 PRO1854Q9UHT4 67 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 KLK12Q9UKR0 248 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms