RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
MBD4-202ENST00000393278 MGAM2Q2M2H8 2515 aa12.21□□□□□ -0.46
MBD4-202ENST00000393278 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
MBD4-202ENST00000393278 H7C423 109 aa12.2□□□□□ -0.46
MBD4-202ENST00000393278 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
MBD4-202ENST00000393278 COX8AP10176 69 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 TCTAP57738 103 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 UBE2L6O14933 153 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
MBD4-202ENST00000393278 SLC25A34Q6PIV7 304 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
MBD4-202ENST00000393278 DEFA6Q01524 100 aa12.17□□□□□ -0.46
MBD4-202ENST00000393278 A0A096LPF7 62 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 IGKV2D-26A0A0A0MRZ7 120 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 NMUP48645 174 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 Q6ZTC4 211 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 C2orf88Q9BSF0 95 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 TP73-AS1Q9UF72 201 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 A0A0J9YXV3 536 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
MBD4-202ENST00000393278 MRPL23Q16540 153 aaKnown RBP12.16□□□□□ -0.46
MBD4-202ENST00000393278 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
MBD4-202ENST00000393278 ZNF25P17030 456 aaPredicted RBP12.15□□□□□ -0.46
MBD4-202ENST00000393278 GAGE6Q13070 117 aa12.15□□□□□ -0.46
MBD4-202ENST00000393278 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
MBD4-202ENST00000393278 CDC42SE2Q9NRR3 84 aa12.15□□□□□ -0.46
MBD4-202ENST00000393278 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
MBD4-202ENST00000393278 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
MBD4-202ENST00000393278 BOD1L2Q8IYS8 172 aa12.14□□□□□ -0.47
MBD4-202ENST00000393278 C11orf45Q8TAV5 145 aa12.14□□□□□ -0.47
MBD4-202ENST00000393278 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
MBD4-202ENST00000393278 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
MBD4-202ENST00000393278 DLEU1O43261 78 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 UBE2D1P51668 147 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 TMEM170BQ5T4T1 132 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 PCP2Q8IVA1 136 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 TENM3Q9P273 2699 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 E9PLD3 99 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 H3BNG1 76 aa12.13□□□□□ -0.47
MBD4-202ENST00000393278 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
MBD4-202ENST00000393278 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
MBD4-202ENST00000393278 TINCRA0A1B0GVN0 87 aa12.12□□□□□ -0.47
MBD4-202ENST00000393278 HERVK_113P61574 105 aa12.12□□□□□ -0.47
MBD4-202ENST00000393278 CTAG1AP78358 180 aa12.12□□□□□ -0.47
MBD4-202ENST00000393278 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
MBD4-202ENST00000393278 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
MBD4-202ENST00000393278 IGLV4-60A0A075B6I1 120 aa12.1□□□□□ -0.47
MBD4-202ENST00000393278 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
MBD4-202ENST00000393278 C2orf91Q6ZV80 131 aa12.1□□□□□ -0.47
MBD4-202ENST00000393278 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
MBD4-202ENST00000393278 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
MBD4-202ENST00000393278 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
MBD4-202ENST00000393278 DEFB131BA0A096LNP1 70 aa12.08□□□□□ -0.48
MBD4-202ENST00000393278 TIRAPP58753 221 aa12.08□□□□□ -0.48
MBD4-202ENST00000393278 A0A1B0GUV1 79 aa12.07□□□□□ -0.48
MBD4-202ENST00000393278 GEMIN7Q9H840 131 aaKnown RBP12.07□□□□□ -0.48
MBD4-202ENST00000393278 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 TMEM262E9PQX1 116 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 SIVA1O15304 175 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 SEC11AP67812 179 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 LELP1Q5T871 98 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 B9D2Q9BPU9 175 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 IGLV5-45A0A087WSX0 123 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 M0R143 59 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 RBX1P62877 108 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
MBD4-202ENST00000393278 HERVK_113P63121 156 aa12.05□□□□□ -0.48
MBD4-202ENST00000393278 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
MBD4-202ENST00000393278 EREGO14944 169 aa12.04□□□□□ -0.48
MBD4-202ENST00000393278 LYPD5Q6UWN5 251 aa12.04□□□□□ -0.48
MBD4-202ENST00000393278 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 LEPROTO15243 131 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 COX6A2Q02221 97 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 TSPEAR-AS2P59090 65 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 DNAH9Q9NYC9 4486 aa12.03□□□□□ -0.48
MBD4-202ENST00000393278 J3QQQ9 107 aa12.02□□□□□ -0.49
MBD4-202ENST00000393278 HIGD1BQ9P298 99 aa12.02□□□□□ -0.49
MBD4-202ENST00000393278 IGHV3-64A0A075B6Q5 118 aa12.01□□□□□ -0.49
MBD4-202ENST00000393278 ZNF815PA8K554 130 aa12.01□□□□□ -0.49
MBD4-202ENST00000393278 H3BRM9 83 aa12.01□□□□□ -0.49
MBD4-202ENST00000393278 PLEKHB2Q96CS7 222 aa12.01□□□□□ -0.49
MBD4-202ENST00000393278 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
MBD4-202ENST00000393278 TRAV8-3A0A0A6YYJ7 113 aa12□□□□□ -0.49
MBD4-202ENST00000393278 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
MBD4-202ENST00000393278 SPINK8P0C7L1 97 aa12□□□□□ -0.49
MBD4-202ENST00000393278 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
MBD4-202ENST00000393278 LGALS3P17931 250 aaKnown RBP12□□□□□ -0.49
MBD4-202ENST00000393278 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
MBD4-202ENST00000393278 LINC00959A0A1B0GUT2 108 aa11.98□□□□□ -0.49
MBD4-202ENST00000393278 BATFQ16520 125 aa11.98□□□□□ -0.49
MBD4-202ENST00000393278 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms