RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PRR14LQ5THK1 2151 aa3.69□□□□□ -1.82
TRAV35-201ENST00000390462 IGLV2-18A0A075B6J9 118 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 MUC21A0A0G2JKD1 596 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 MUC21A0A140T8X8 626 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 HYPMO75409 117 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 MIFP14174 115 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 CATR1Q13166 79 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 MIC13Q5XKP0 118 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 KRTAP11-1Q8IUC1 163 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 MUCL1Q96DR8 90 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 Q9BRP9 147 aa3.68□□□□□ -1.82
TRAV35-201ENST00000390462 KIAA1549Q9HCM3 1950 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 IBA57-AS1B1ANH7 110 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 DCDP81605 110 aaKnown RBP3.67□□□□□ -1.82
TRAV35-201ENST00000390462 MOBPQ13875 183 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 ZNF846Q147U1 533 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 DEFB134Q4QY38 66 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 Q56UQ5 140 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 PSMF1Q92530 271 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 TAS2R8Q9NYW2 309 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 CHCHD2Q9Y6H1 151 aaPredicted RBP3.67□□□□□ -1.82
TRAV35-201ENST00000390462 TANC2Q9HCD6 1990 aa3.67□□□□□ -1.82
TRAV35-201ENST00000390462 IGHV1-24A0A0C4DH33 117 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 UBL3O95164 117 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 SSR2P43308 183 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 DSCR4P56555 118 aaPredicted RBP3.66□□□□□ -1.82
TRAV35-201ENST00000390462 DEFB110Q30KQ9 67 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 MRPL54Q6P161 138 aaKnown RBP3.66□□□□□ -1.82
TRAV35-201ENST00000390462 ATP11AUNQ6ZP68 121 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 OR4X2Q8NGF9 303 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 Q96M85 177 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 SERP1Q9Y6X1 66 aa3.66□□□□□ -1.82
TRAV35-201ENST00000390462 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
TRAV35-201ENST00000390462 GEMIN2O14893 280 aaKnown RBP3.65□□□□□ -1.83
TRAV35-201ENST00000390462 UQCRHP07919 91 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 ARPINQ7Z6K5 226 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 FAM19A2Q8N3H0 131 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 ATP6V0E2Q8NHE4 81 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 CMTM2Q8TAZ6 248 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 FREM3P0C091 2139 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 MED12Q93074 2177 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.83
TRAV35-201ENST00000390462 FREM1Q5H8C1 2179 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 E7EUB6 86 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 ASAH2BP0C7U1 165 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 TMEM254Q8TBM7 123 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 LHFPL6Q9Y693 200 aa3.64□□□□□ -1.83
TRAV35-201ENST00000390462 EPPK1P58107 5090 aaKnown RBP3.64□□□□□ -1.83
TRAV35-201ENST00000390462 ROS1P08922 2347 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 IGKV2-28A0A075B6P5 120 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 LOC107984156A0A0G2JMH3 177 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 C3orf85A0A1B0GTC6 90 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 MCRIP1C9JLW8 97 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 APOC4-APOC2K7ER74 178 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 IGKV2D-28P01615 120 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 APOC2P02655 101 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 SPINT3P49223 89 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 S100A10P60903 97 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 ARL17AQ8IVW1 177 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 LINC00269Q8N2A0 174 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 SFT2D1Q8WV19 159 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 SNHG12Q9BXW3 62 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 NOP16Q9Y3C1 178 aaKnown RBP3.63□□□□□ -1.83
TRAV35-201ENST00000390462 WNK1Q9H4A3 2382 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 HEATR5BQ9P2D3 2071 aa3.63□□□□□ -1.83
TRAV35-201ENST00000390462 A0A087WSZ3 146 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 IGKV3D-11A0A0A0MRZ8 115 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 J3QLW9 94 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 EDF1O60869 148 aaKnown RBP3.62□□□□□ -1.83
TRAV35-201ENST00000390462 CTSGP08311 255 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 COL5A1-AS1Q5SY13 56 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 C9orf153Q5TBE3 101 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 SVBPQ8N300 66 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 VSTM2AQ8TAG5 236 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 SMIM7Q9BQ49 75 aa3.62□□□□□ -1.83
TRAV35-201ENST00000390462 SCN3AQ9NY46 2000 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 RTL8CO15255 209 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 STATHP02808 62 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 SPINK8P0C7L1 97 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 Q6AWC8 147 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 LCN9Q8WX39 176 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 LSM10Q969L4 123 aaKnown RBP3.61□□□□□ -1.83
TRAV35-201ENST00000390462 LINC00526Q96FQ7 95 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 CCL19Q99731 98 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 SMAD5-AS1Q9Y6J3 95 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 ARHGAP32A7KAX9 2087 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 VWFP04275 2813 aa3.61□□□□□ -1.83
TRAV35-201ENST00000390462 IFITM1P13164 125 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 OR2T2Q6IF00 324 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 Q6ZTI0 123 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 MED12LQ86YW9 2145 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 TTC9CQ8N5M4 171 aa3.6□□□□□ -1.83
TRAV35-201ENST00000390462 C5orf17Q8NAS9 161 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms