RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MYMXA0A1B0GTQ4 84 aa13.97□□□□□ -0.17
PDLIM5-205ENST00000380180 MRPS36P82909 103 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-205ENST00000380180 HSD52Q0P140 79 aa13.97□□□□□ -0.17
PDLIM5-205ENST00000380180 ZNF22P17026 224 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-205ENST00000380180 CMYA5Q8N3K9 4069 aa13.95□□□□□ -0.18
PDLIM5-205ENST00000380180 TMEM223A0PJW6 202 aa13.95□□□□□ -0.18
PDLIM5-205ENST00000380180 ZNF25P17030 456 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-205ENST00000380180 TMEM243Q9BU79 118 aa13.94□□□□□ -0.18
PDLIM5-205ENST00000380180 CSDC2Q9Y534 153 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-205ENST00000380180 PRO0255Q9UI72 69 aa13.93□□□□□ -0.18
PDLIM5-205ENST00000380180 CELA1Q9UNI1 258 aa13.93□□□□□ -0.18
PDLIM5-205ENST00000380180 A8MZ25 164 aa13.93□□□□□ -0.18
PDLIM5-205ENST00000380180 GYPEP15421 78 aa13.93□□□□□ -0.18
PDLIM5-205ENST00000380180 DAD1P61803 113 aa13.93□□□□□ -0.18
PDLIM5-205ENST00000380180 ZNF815PA8K554 130 aa13.92□□□□□ -0.18
PDLIM5-205ENST00000380180 G3V4G9 280 aa13.92□□□□□ -0.18
PDLIM5-205ENST00000380180 TINCRA0A1B0GVN0 87 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 UBE2L6O14933 153 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 TSPEAR-AS2P59090 65 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 ORAOV1Q8WV07 137 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 TRBV6-8A0A0A6YYG3 113 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 UBE2D1P51668 147 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 Q6ZVH6 145 aa13.91□□□□□ -0.18
PDLIM5-205ENST00000380180 SPART-AS1P0CW21 52 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 SEC11AP67812 179 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 LURAP1LQ8IV03 231 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 SMAGPQ0VAQ4 97 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 AMMECR1LQ6DCA0 310 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 ATP6V0E2Q8NHE4 81 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 CDC42SE2Q9NRR3 84 aa13.9□□□□□ -0.18
PDLIM5-205ENST00000380180 IGHV3-64A0A075B6Q5 118 aa13.89□□□□□ -0.19
PDLIM5-205ENST00000380180 H7C423 109 aa13.89□□□□□ -0.19
PDLIM5-205ENST00000380180 J3QQQ9 107 aa13.89□□□□□ -0.19
PDLIM5-205ENST00000380180 OR5A1Q8NGJ0 315 aa13.89□□□□□ -0.19
PDLIM5-205ENST00000380180 LEPROTO15243 131 aa13.88□□□□□ -0.19
PDLIM5-205ENST00000380180 PAX4O43316 350 aa13.88□□□□□ -0.19
PDLIM5-205ENST00000380180 GCSHP23434 173 aa13.88□□□□□ -0.19
PDLIM5-205ENST00000380180 PLEKHB2Q96CS7 222 aa13.88□□□□□ -0.19
PDLIM5-205ENST00000380180 LGALS3P17931 250 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-205ENST00000380180 SCGB1D4Q6XE38 83 aa13.87□□□□□ -0.19
PDLIM5-205ENST00000380180 TMEM101Q96IK0 257 aa13.87□□□□□ -0.19
PDLIM5-205ENST00000380180 GEMIN7Q9H840 131 aaKnown RBP13.87□□□□□ -0.19
PDLIM5-205ENST00000380180 TAX1BP3O14907 124 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 ATP5G1P05496 136 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 GAGE6Q13070 117 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 VSIG2Q96IQ7 327 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 RETNQ9HD89 108 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 A0A0J9YY99 117 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 CEND1Q8N111 149 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 LINC00469Q8N7U9 141 aa13.86□□□□□ -0.19
PDLIM5-205ENST00000380180 TIRAPP58753 221 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 TAL2Q16559 108 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 HIST1H4GQ99525 98 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 CHCHD5Q9BSY4 110 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 COX11Q9Y6N1 276 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 TRAV8-3A0A0A6YYJ7 113 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 A6NDN8 102 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 K7EP13 123 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 FXYD2P54710 66 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 COX6A2Q02221 97 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 LINC00242Q5T6M2 205 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 TM2D2Q9BX73 214 aa13.85□□□□□ -0.19
PDLIM5-205ENST00000380180 A0A096LPF7 62 aa13.84□□□□□ -0.19
PDLIM5-205ENST00000380180 IGHV3-30-3P0DP02 117 aa13.84□□□□□ -0.19
PDLIM5-205ENST00000380180 SAMD5Q5TGI4 173 aa13.84□□□□□ -0.19
PDLIM5-205ENST00000380180 CDKN2A-AS1Q9UH64 79 aa13.84□□□□□ -0.19
PDLIM5-205ENST00000380180 TRAV13-1A0A0B4J241 112 aa13.83□□□□□ -0.2
PDLIM5-205ENST00000380180 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
PDLIM5-205ENST00000380180 F5H768 121 aa13.83□□□□□ -0.2
PDLIM5-205ENST00000380180 FAM19A3Q7Z5A8 133 aa13.83□□□□□ -0.2
PDLIM5-205ENST00000380180 ANK2Q01484 3957 aa13.82□□□□□ -0.2
PDLIM5-205ENST00000380180 TRAV26-1A0A087WT03 109 aa13.82□□□□□ -0.2
PDLIM5-205ENST00000380180 IGHV1-58A0A0C4DH39 117 aa13.82□□□□□ -0.2
PDLIM5-205ENST00000380180 SPINK8P0C7L1 97 aa13.82□□□□□ -0.2
PDLIM5-205ENST00000380180 NOTCH1P46531 2555 aa13.82□□□□□ -0.2
PDLIM5-205ENST00000380180 HTN3P15516 51 aa13.81□□□□□ -0.2
PDLIM5-205ENST00000380180 HERVK_113P63121 156 aa13.81□□□□□ -0.2
PDLIM5-205ENST00000380180 IGLV4-60A0A075B6I1 120 aa13.81□□□□□ -0.2
PDLIM5-205ENST00000380180 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
PDLIM5-205ENST00000380180 TEX48A0A1B0GUV7 120 aa13.79□□□□□ -0.2
PDLIM5-205ENST00000380180 H3BRM9 83 aa13.79□□□□□ -0.2
PDLIM5-205ENST00000380180 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDLIM5-205ENST00000380180 C12orf74Q32Q52 190 aa13.78□□□□□ -0.2
PDLIM5-205ENST00000380180 DNAH3Q8TD57 4116 aa13.78□□□□□ -0.2
PDLIM5-205ENST00000380180 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
PDLIM5-205ENST00000380180 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
PDLIM5-205ENST00000380180 C10orf126Q8N4M7 172 aa13.76□□□□□ -0.21
PDLIM5-205ENST00000380180 RAB37Q96AX2 223 aa13.76□□□□□ -0.21
PDLIM5-205ENST00000380180 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-205ENST00000380180 IGKV3OR2-268A0A0C4DH90 116 aa13.75□□□□□ -0.21
PDLIM5-205ENST00000380180 PRB2P02812 416 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-205ENST00000380180 MRPL23Q16540 153 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-205ENST00000380180 SPANXB1Q9NS25 103 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-205ENST00000380180 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
PDLIM5-205ENST00000380180 A0A1B0GUV1 79 aa13.74□□□□□ -0.21
PDLIM5-205ENST00000380180 NDUFA12Q9UI09 145 aa13.74□□□□□ -0.21
PDLIM5-205ENST00000380180 NBEAL1Q6ZS30 2694 aa13.73□□□□□ -0.21
PDLIM5-205ENST00000380180 K7ERJ3 54 aa13.73□□□□□ -0.21
PDLIM5-205ENST00000380180 A0A0J9YXY3 114 aa13.73□□□□□ -0.21
PDLIM5-205ENST00000380180 RBX1P62877 108 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms