RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TMEM243Q9BU79 118 aa12.14□□□□□ -0.47
THUMPD2-201ENST00000378727 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
THUMPD2-201ENST00000378727 PAX4O43316 350 aa12.13□□□□□ -0.47
THUMPD2-201ENST00000378727 NBEAL1Q6ZS30 2694 aa12.13□□□□□ -0.47
THUMPD2-201ENST00000378727 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 E9PLD3 99 aa12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
THUMPD2-201ENST00000378727 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
THUMPD2-201ENST00000378727 A0A0J9YY99 117 aa12.11□□□□□ -0.47
THUMPD2-201ENST00000378727 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
THUMPD2-201ENST00000378727 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
THUMPD2-201ENST00000378727 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
THUMPD2-201ENST00000378727 BATFQ16520 125 aa12.1□□□□□ -0.47
THUMPD2-201ENST00000378727 HINT1P49773 126 aaPredicted RBP12.1□□□□□ -0.47
THUMPD2-201ENST00000378727 LBHQ53QV2 105 aaPredicted RBP12.1□□□□□ -0.47
THUMPD2-201ENST00000378727 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
THUMPD2-201ENST00000378727 F5H768 121 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 SIVA1O15304 175 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 MPV17L2Q567V2 206 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 TENM3Q9P273 2699 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 TRAV26-1A0A087WT03 109 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 TEX48A0A1B0GUV7 120 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 H7C423 109 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 K7EIL1 84 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 UBE2L6O14933 153 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 UBE2D1P51668 147 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 KPRPQ5T749 579 aaPredicted RBP12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 CDC42SE2Q9NRR3 84 aa12.09□□□□□ -0.47
THUMPD2-201ENST00000378727 A0A096LPF7 62 aa12.08□□□□□ -0.48
THUMPD2-201ENST00000378727 HTN3P15516 51 aa12.08□□□□□ -0.48
THUMPD2-201ENST00000378727 TMEM97Q5BJF2 176 aa12.08□□□□□ -0.48
THUMPD2-201ENST00000378727 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 OR5A1Q8NGJ0 315 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 MGAM2Q2M2H8 2515 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 HERVK_113P61574 105 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 GAGE6Q13070 117 aa12.07□□□□□ -0.48
THUMPD2-201ENST00000378727 SMAGPQ0VAQ4 97 aa12.06□□□□□ -0.48
THUMPD2-201ENST00000378727 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
THUMPD2-201ENST00000378727 TSPEAR-AS2P59090 65 aa12.06□□□□□ -0.48
THUMPD2-201ENST00000378727 BVES-AS1Q5T3Y7 98 aa12.05□□□□□ -0.48
THUMPD2-201ENST00000378727 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
THUMPD2-201ENST00000378727 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
THUMPD2-201ENST00000378727 HIGD1BQ9P298 99 aa12.04□□□□□ -0.48
THUMPD2-201ENST00000378727 A0A0J9YWU9 116 aa12.04□□□□□ -0.48
THUMPD2-201ENST00000378727 ZNF25P17030 456 aaPredicted RBP12.04□□□□□ -0.48
THUMPD2-201ENST00000378727 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
THUMPD2-201ENST00000378727 COX6A2Q02221 97 aa12.02□□□□□ -0.48
THUMPD2-201ENST00000378727 LINC00242Q5T6M2 205 aa12.02□□□□□ -0.48
THUMPD2-201ENST00000378727 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
THUMPD2-201ENST00000378727 TIRAPP58753 221 aa12.02□□□□□ -0.49
THUMPD2-201ENST00000378727 FAM19A3Q7Z5A8 133 aa12.02□□□□□ -0.49
THUMPD2-201ENST00000378727 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 TRAV13-1A0A0B4J241 112 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 ZNF815PA8K554 130 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 LEPROTO15243 131 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 DEFB121Q5J5C9 76 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 Q6ZTC4 211 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 TM2D3Q9BRN9 247 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 A0A1B0GV90 55 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 J3QQQ9 107 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 HSD52Q0P140 79 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 MRPL23Q16540 153 aaKnown RBP12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 COL5A1-AS1Q5SY13 56 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 CDKN2A-AS1Q9UH64 79 aa12.01□□□□□ -0.49
THUMPD2-201ENST00000378727 MRAPQ8TCY5 172 aa12□□□□□ -0.49
THUMPD2-201ENST00000378727 SPATA25Q9BR10 227 aa12□□□□□ -0.49
THUMPD2-201ENST00000378727 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
THUMPD2-201ENST00000378727 TRAV8-3A0A0A6YYJ7 113 aa11.99□□□□□ -0.49
THUMPD2-201ENST00000378727 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
THUMPD2-201ENST00000378727 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
THUMPD2-201ENST00000378727 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
THUMPD2-201ENST00000378727 HERVK_113P63121 156 aa11.98□□□□□ -0.49
THUMPD2-201ENST00000378727 LGALS3P17931 250 aaKnown RBP11.98□□□□□ -0.49
THUMPD2-201ENST00000378727 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
THUMPD2-201ENST00000378727 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
THUMPD2-201ENST00000378727 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
THUMPD2-201ENST00000378727 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
THUMPD2-201ENST00000378727 RBX1P62877 108 aa11.97□□□□□ -0.49
THUMPD2-201ENST00000378727 SEC11AP67812 179 aa11.96□□□□□ -0.49
THUMPD2-201ENST00000378727 C11orf45Q8TAV5 145 aa11.96□□□□□ -0.49
THUMPD2-201ENST00000378727 SH2D6Q7Z4S9 175 aa11.96□□□□□ -0.5
THUMPD2-201ENST00000378727 ORAOV1Q8WV07 137 aa11.95□□□□□ -0.5
THUMPD2-201ENST00000378727 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
THUMPD2-201ENST00000378727 H3BNG1 76 aa11.95□□□□□ -0.5
THUMPD2-201ENST00000378727 H3BRM9 83 aa11.95□□□□□ -0.5
THUMPD2-201ENST00000378727 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
THUMPD2-201ENST00000378727 Q8N3U1 123 aa11.94□□□□□ -0.5
THUMPD2-201ENST00000378727 LELP1Q5T871 98 aa11.93□□□□□ -0.5
THUMPD2-201ENST00000378727 K7EP13 123 aa11.93□□□□□ -0.5
THUMPD2-201ENST00000378727 GCSHP23434 173 aa11.93□□□□□ -0.5
THUMPD2-201ENST00000378727 FXYD2P54710 66 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms