RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 TMEM89A2RUT3 159 aa16.58■□□□□ 0.25
FOXA2-201ENST00000377115 DEFB136Q30KP8 78 aa16.58■□□□□ 0.24
FOXA2-201ENST00000377115 SHISA2Q6UWI4 295 aa16.58■□□□□ 0.24
FOXA2-201ENST00000377115 DNAJC30Q96LL9 226 aa16.58■□□□□ 0.24
FOXA2-201ENST00000377115 NCOR2Q9Y618 2525 aa16.58■□□□□ 0.24
FOXA2-201ENST00000377115 GNLYP22749 145 aa16.57■□□□□ 0.24
FOXA2-201ENST00000377115 SLURP1P55000 103 aa16.57■□□□□ 0.24
FOXA2-201ENST00000377115 DAZ2Q13117 558 aaKnown RBP16.57■□□□□ 0.24
FOXA2-201ENST00000377115 DAZ4Q86SG3 579 aaKnown RBP16.57■□□□□ 0.24
FOXA2-201ENST00000377115 LINC01587Q99440 93 aa16.57■□□□□ 0.24
FOXA2-201ENST00000377115 DAZ3Q9NR90 486 aaKnown RBP16.57■□□□□ 0.24
FOXA2-201ENST00000377115 LINC00694P0DN24 101 aa16.57■□□□□ 0.24
FOXA2-201ENST00000377115 PIK3CD-AS1Q5SR53 167 aa16.57■□□□□ 0.24
FOXA2-201ENST00000377115 A8MTW9 85 aa16.56■□□□□ 0.24
FOXA2-201ENST00000377115 ACYP1P07311 99 aa16.56■□□□□ 0.24
FOXA2-201ENST00000377115 HERVK_113P63121 156 aa16.56■□□□□ 0.24
FOXA2-201ENST00000377115 SMIM1B2RUZ4 78 aa16.56■□□□□ 0.24
FOXA2-201ENST00000377115 C18orf65Q6ZTR6 163 aa16.56■□□□□ 0.24
FOXA2-201ENST00000377115 BEAN1Q3B7T3 259 aa16.55■□□□□ 0.24
FOXA2-201ENST00000377115 B4DSR2 109 aa16.55■□□□□ 0.24
FOXA2-201ENST00000377115 CHD8Q9HCK8 2581 aa16.54■□□□□ 0.24
FOXA2-201ENST00000377115 TRAV13-1A0A0B4J241 112 aa16.54■□□□□ 0.24
FOXA2-201ENST00000377115 FAM218AQ96MZ4 157 aa16.54■□□□□ 0.24
FOXA2-201ENST00000377115 PRIMA1Q86XR5 153 aa16.54■□□□□ 0.24
FOXA2-201ENST00000377115 C22orf24Q9Y442 160 aa16.53■□□□□ 0.24
FOXA2-201ENST00000377115 ITPR1Q14643 2758 aa16.52■□□□□ 0.24
FOXA2-201ENST00000377115 RS1O15537 224 aa16.52■□□□□ 0.24
FOXA2-201ENST00000377115 BAALC-AS2P0C853 105 aa16.52■□□□□ 0.24
FOXA2-201ENST00000377115 UBE2E2Q96LR5 201 aa16.52■□□□□ 0.24
FOXA2-201ENST00000377115 IMUPQ9GZP8 106 aa16.52■□□□□ 0.24
FOXA2-201ENST00000377115 CUBNO60494 3623 aa16.51■□□□□ 0.23
FOXA2-201ENST00000377115 PRORYQ9H606 182 aa16.51■□□□□ 0.23
FOXA2-201ENST00000377115 LINC00643Q86TS7 51 aa16.5■□□□□ 0.23
FOXA2-201ENST00000377115 TRACP01848 142 aa16.5■□□□□ 0.23
FOXA2-201ENST00000377115 ZANQ9Y493 2812 aa16.5■□□□□ 0.23
FOXA2-201ENST00000377115 MAP6D1Q9H9H5 199 aa16.49■□□□□ 0.23
FOXA2-201ENST00000377115 COPS9Q8WXC6 57 aa16.48■□□□□ 0.23
FOXA2-201ENST00000377115 ZNF702PQ9H963 129 aa16.47■□□□□ 0.23
FOXA2-201ENST00000377115 Q9HAA7 133 aa16.47■□□□□ 0.23
FOXA2-201ENST00000377115 F5H768 121 aa16.46■□□□□ 0.23
FOXA2-201ENST00000377115 INSP01308 110 aa16.46■□□□□ 0.23
FOXA2-201ENST00000377115 NTM-AS1Q6ZSK4 140 aa16.46■□□□□ 0.23
FOXA2-201ENST00000377115 FAM19A3Q7Z5A8 133 aa16.46■□□□□ 0.23
FOXA2-201ENST00000377115 TMEM126AQ9H061 195 aa16.46■□□□□ 0.23
FOXA2-201ENST00000377115 SPTBN4Q9H254 2564 aa16.45■□□□□ 0.22
FOXA2-201ENST00000377115 SDIM1Q6ZPB5 146 aa16.45■□□□□ 0.22
FOXA2-201ENST00000377115 NRGNQ92686 78 aa16.45■□□□□ 0.22
FOXA2-201ENST00000377115 XCL2Q9UBD3 114 aa16.44■□□□□ 0.22
FOXA2-201ENST00000377115 VPREB3Q9UKI3 123 aa16.44■□□□□ 0.22
FOXA2-201ENST00000377115 HIST2H2BDQ6DRA6 164 aa16.44■□□□□ 0.22
FOXA2-201ENST00000377115 MAPK1IP1LQ8NDC0 245 aa16.44■□□□□ 0.22
FOXA2-201ENST00000377115 Q96MF0 132 aa16.43■□□□□ 0.22
FOXA2-201ENST00000377115 MXRA5Q9NR99 2828 aa16.43■□□□□ 0.22
FOXA2-201ENST00000377115 TRGV1A0A0A0MS02 117 aa16.43■□□□□ 0.22
FOXA2-201ENST00000377115 GAGE2AQ6NT46 116 aa16.43■□□□□ 0.22
FOXA2-201ENST00000377115 PEMTQ9UBM1 199 aa16.43■□□□□ 0.22
FOXA2-201ENST00000377115 C9orf153Q5TBE3 101 aa16.42■□□□□ 0.22
FOXA2-201ENST00000377115 C3orf22Q8N5N4 141 aa16.41■□□□□ 0.22
FOXA2-201ENST00000377115 CDC42SE2Q9NRR3 84 aa16.41■□□□□ 0.22
FOXA2-201ENST00000377115 HIST2H2BCQ6DN03 193 aa16.41■□□□□ 0.22
FOXA2-201ENST00000377115 USP9YO00507 2555 aaPredicted RBP16.41■□□□□ 0.22
FOXA2-201ENST00000377115 FAM222AQ5U5X8 452 aa16.4■□□□□ 0.22
FOXA2-201ENST00000377115 CSDC2Q9Y534 153 aaKnown RBP16.4■□□□□ 0.22
FOXA2-201ENST00000377115 MALP21145 153 aa16.39■□□□□ 0.21
FOXA2-201ENST00000377115 RPL36AP83881 106 aaKnown RBP16.39■□□□□ 0.21
FOXA2-201ENST00000377115 LINC00337Q8N6G1 96 aa16.39■□□□□ 0.21
FOXA2-201ENST00000377115 DYNLRB2Q8TF09 96 aa16.39■□□□□ 0.21
FOXA2-201ENST00000377115 RPL36ALQ969Q0 106 aaKnown RBP16.39■□□□□ 0.21
FOXA2-201ENST00000377115 C2CD3Q4AC94 2353 aa16.39■□□□□ 0.21
FOXA2-201ENST00000377115 C5orf38Q86SI9 138 aa16.38■□□□□ 0.21
FOXA2-201ENST00000377115 K7EQD1 137 aa16.38■□□□□ 0.21
FOXA2-201ENST00000377115 LINC01356Q8N9X3 169 aa16.38■□□□□ 0.21
FOXA2-201ENST00000377115 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
FOXA2-201ENST00000377115 INAFM2P0DMQ5 153 aa16.37■□□□□ 0.21
FOXA2-201ENST00000377115 CRPP02741 224 aa16.37■□□□□ 0.21
FOXA2-201ENST00000377115 RPL28P46779 137 aaKnown RBP16.37■□□□□ 0.21
FOXA2-201ENST00000377115 Q6ZTI0 123 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 C1orf158Q8N1D5 194 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 IGKV2-28A0A075B6P5 120 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 TRAV13-2A0A0B4J235 113 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 UQCRQO14949 82 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 IGKV2D-28P01615 120 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 C9orf129Q5T035 196 aaKnown RBP16.36■□□□□ 0.21
FOXA2-201ENST00000377115 MIR7-3HGQ8N6C7 128 aa16.36■□□□□ 0.21
FOXA2-201ENST00000377115 PPDPFQ9H3Y8 114 aa16.35■□□□□ 0.21
FOXA2-201ENST00000377115 A0A087WYN8 130 aa16.35■□□□□ 0.21
FOXA2-201ENST00000377115 CXCL5P42830 114 aa16.35■□□□□ 0.21
FOXA2-201ENST00000377115 IL17DQ8TAD2 202 aa16.34■□□□□ 0.21
FOXA2-201ENST00000377115 FLNCQ14315 2725 aa16.34■□□□□ 0.21
FOXA2-201ENST00000377115 AKAP9Q99996 3911 aa16.34■□□□□ 0.21
FOXA2-201ENST00000377115 DEFB114Q30KQ6 69 aa16.34■□□□□ 0.21
FOXA2-201ENST00000377115 Q6YL49 198 aa16.33■□□□□ 0.2
FOXA2-201ENST00000377115 LINC00526Q96FQ7 95 aa16.33■□□□□ 0.2
FOXA2-201ENST00000377115 KLK5Q9Y337 293 aaPredicted RBP16.33■□□□□ 0.2
FOXA2-201ENST00000377115 SND1-IT1Q9HBX3 110 aa16.33■□□□□ 0.2
FOXA2-201ENST00000377115 TRBV10-1A0A0K0K1A3 114 aa16.32■□□□□ 0.2
FOXA2-201ENST00000377115 PF4P02776 101 aa16.32■□□□□ 0.2
FOXA2-201ENST00000377115 TOMM7Q9P0U1 55 aa16.32■□□□□ 0.2
FOXA2-201ENST00000377115 ATP5G1P05496 136 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms