RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
NELFE-201ENST00000375425 TRBV27A0A0K0K1C4 114 aa9.01□□□□□ -0.97
NELFE-201ENST00000375425 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
NELFE-201ENST00000375425 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
NELFE-201ENST00000375425 V9GYV3 84 aa9.01□□□□□ -0.97
NELFE-201ENST00000375425 TNXBP22105 4242 aa9□□□□□ -0.97
NELFE-201ENST00000375425 CCL25O15444 150 aa9□□□□□ -0.97
NELFE-201ENST00000375425 NUP35Q8NFH5 326 aa9□□□□□ -0.97
NELFE-201ENST00000375425 CDC42SE2Q9NRR3 84 aa9□□□□□ -0.97
NELFE-201ENST00000375425 IGKV2-24A0A0C4DH68 120 aa8.99□□□□□ -0.97
NELFE-201ENST00000375425 SMKR1H3BMG3 65 aa8.99□□□□□ -0.97
NELFE-201ENST00000375425 RIGQ13278 110 aa8.99□□□□□ -0.97
NELFE-201ENST00000375425 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
NELFE-201ENST00000375425 MAJINQ3KP22 176 aa8.99□□□□□ -0.97
NELFE-201ENST00000375425 C7orf77A4D0Y5 90 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 VCYO14598 125 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 SS18Q15532 418 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 Q6ZRU5 148 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 MRPL52Q86TS9 123 aaKnown RBP8.98□□□□□ -0.97
NELFE-201ENST00000375425 ZNF664Q8N3J9 261 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 ISOC2Q96AB3 205 aa8.98□□□□□ -0.97
NELFE-201ENST00000375425 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 PHOX2AO14813 284 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 RPL23P62829 140 aaKnown RBP8.97□□□□□ -0.97
NELFE-201ENST00000375425 FAM74A3Q4VXF1 159 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 STPG4Q8N801 248 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 LINC00526Q96FQ7 95 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 UBR4Q5T4S7 5183 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 PPP1R17O96001 155 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 FCER1GP30273 86 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 CD164L2Q6UWJ8 174 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 NRACQ8N912 160 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
NELFE-201ENST00000375425 C9JQL5 133 aa8.96□□□□□ -0.98
NELFE-201ENST00000375425 SUMO2P61956 95 aaKnown RBP8.96□□□□□ -0.98
NELFE-201ENST00000375425 ADIRFQ15847 76 aa8.96□□□□□ -0.98
NELFE-201ENST00000375425 A0A096LNI7 61 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 FAM104BQ5XKR9 115 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
NELFE-201ENST00000375425 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
NELFE-201ENST00000375425 C1orf196B1AJZ1 125 aa8.94□□□□□ -0.98
NELFE-201ENST00000375425 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
NELFE-201ENST00000375425 SRSF3P84103 164 aaKnown RBP8.94□□□□□ -0.98
NELFE-201ENST00000375425 MRPL51Q4U2R6 128 aaKnown RBP8.94□□□□□ -0.98
NELFE-201ENST00000375425 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
NELFE-201ENST00000375425 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
NELFE-201ENST00000375425 CSDC2Q9Y534 153 aaKnown RBP8.94□□□□□ -0.98
NELFE-201ENST00000375425 PPP1R2P9O14990 202 aa8.93□□□□□ -0.98
NELFE-201ENST00000375425 CAMPP49913 170 aa8.93□□□□□ -0.98
NELFE-201ENST00000375425 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
NELFE-201ENST00000375425 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
NELFE-201ENST00000375425 SMAGPQ0VAQ4 97 aa8.92□□□□□ -0.98
NELFE-201ENST00000375425 PEA15Q15121 130 aa8.92□□□□□ -0.98
NELFE-201ENST00000375425 RNASE13Q5GAN3 156 aaKnown RBP8.92□□□□□ -0.98
NELFE-201ENST00000375425 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
NELFE-201ENST00000375425 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
NELFE-201ENST00000375425 MALP21145 153 aa8.91□□□□□ -0.98
NELFE-201ENST00000375425 CKS2P33552 79 aa8.91□□□□□ -0.98
NELFE-201ENST00000375425 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
NELFE-201ENST00000375425 IGLV4-69A0A075B6H9 119 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 TRBV24-1A0A075B6N3 115 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 A0A1B0GW15 77 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 COX7A2LO14548 114 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
NELFE-201ENST00000375425 C20orf78Q9BR46 151 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 SMDT1Q9H4I9 107 aa8.9□□□□□ -0.98
NELFE-201ENST00000375425 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
NELFE-201ENST00000375425 TNFRSF6BO95407 300 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 MRPL54Q6P161 138 aaKnown RBP8.88□□□□□ -0.99
NELFE-201ENST00000375425 Q6ZUT4 128 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 C5orf38Q86SI9 138 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
NELFE-201ENST00000375425 RPL32P62910 135 aaKnown RBP8.88□□□□□ -0.99
NELFE-201ENST00000375425 IFITM2Q01629 132 aa8.88□□□□□ -0.99
NELFE-201ENST00000375425 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 D6R8Y8 96 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 F8W036 122 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 TCAPO15273 167 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 HBBP68871 147 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
NELFE-201ENST00000375425 S100A8P05109 93 aa8.86□□□□□ -0.99
NELFE-201ENST00000375425 SMIM2Q9BVW6 85 aa8.86□□□□□ -0.99
NELFE-201ENST00000375425 A0A1B0GXF2 115 aa8.85□□□□□ -0.99
NELFE-201ENST00000375425 APOMO95445 188 aa8.85□□□□□ -0.99
NELFE-201ENST00000375425 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
NELFE-201ENST00000375425 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
NELFE-201ENST00000375425 LINC01600Q96MT4 127 aa8.85□□□□□ -0.99
NELFE-201ENST00000375425 NPYP01303 97 aa8.84□□□□□ -0.99
NELFE-201ENST00000375425 Q6ZRP5 223 aa8.84□□□□□ -0.99
NELFE-201ENST00000375425 OPRPNQ99935 248 aaPredicted RBP8.84□□□□□ -0.99
NELFE-201ENST00000375425 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
NELFE-201ENST00000375425 A0A1W2PNN7 141 aa8.83□□□□□ -1
NELFE-201ENST00000375425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms