RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 TRAV13-2A0A0B4J235 113 aa13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 MUC4Q99102 2169 aa13.23□□□□□ -0.29
PTPDC1-202ENST00000375360 CRIP2P52943 208 aaPredicted RBP13.22□□□□□ -0.29
PTPDC1-202ENST00000375360 CDKN2A-AS1Q9UH64 79 aa13.22□□□□□ -0.29
PTPDC1-202ENST00000375360 IGHV4-4A0A075B6R2 117 aa13.21□□□□□ -0.29
PTPDC1-202ENST00000375360 LINC00269Q8N2A0 174 aa13.21□□□□□ -0.29
PTPDC1-202ENST00000375360 HERV-K104P63124 156 aa13.21□□□□□ -0.29
PTPDC1-202ENST00000375360 CRYGDP07320 174 aa13.21□□□□□ -0.29
PTPDC1-202ENST00000375360 HIST1H4AP62805 103 aaKnown RBP13.21□□□□□ -0.3
PTPDC1-202ENST00000375360 NRACQ8N912 160 aa13.2□□□□□ -0.3
PTPDC1-202ENST00000375360 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
PTPDC1-202ENST00000375360 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
PTPDC1-202ENST00000375360 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
PTPDC1-202ENST00000375360 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
PTPDC1-202ENST00000375360 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 OVOL2Q9BRP0 275 aa13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 IGLV4-3A0A075B6K6 122 aa13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
PTPDC1-202ENST00000375360 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
PTPDC1-202ENST00000375360 MIR7-3HGQ8N6C7 128 aa13.18□□□□□ -0.3
PTPDC1-202ENST00000375360 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
PTPDC1-202ENST00000375360 F8WEM9 126 aa13.17□□□□□ -0.3
PTPDC1-202ENST00000375360 U3KQK5 164 aa13.17□□□□□ -0.3
PTPDC1-202ENST00000375360 IGHV4-28A0A0C4DH34 117 aa13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 LYRM9A8MSI8 78 aa13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 NTN5Q8WTR8 489 aaPredicted RBP13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 TRBV27A0A0K0K1C4 114 aa13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 F8W1H4 67 aa13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 IFITM1P13164 125 aa13.16□□□□□ -0.3
PTPDC1-202ENST00000375360 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
PTPDC1-202ENST00000375360 LINC00310P59036 64 aa13.15□□□□□ -0.3
PTPDC1-202ENST00000375360 HIGD2BQ4VC39 106 aa13.15□□□□□ -0.3
PTPDC1-202ENST00000375360 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
PTPDC1-202ENST00000375360 UBE2BP63146 152 aa13.14□□□□□ -0.31
PTPDC1-202ENST00000375360 HIGD1BQ9P298 99 aa13.14□□□□□ -0.31
PTPDC1-202ENST00000375360 RS1O15537 224 aa13.14□□□□□ -0.31
PTPDC1-202ENST00000375360 GAGE12HA6NDE8 117 aa13.14□□□□□ -0.31
PTPDC1-202ENST00000375360 A8MZ25 164 aa13.14□□□□□ -0.31
PTPDC1-202ENST00000375360 TAX1BP3O14907 124 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 TMEM126AQ9H061 195 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 ZNF22P17026 224 aaPredicted RBP13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 POLR2KP53803 58 aaKnown RBP13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 REG3AQ06141 175 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 TRBV6-8A0A0A6YYG3 113 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 MIFP14174 115 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 MAPKAPK5-AS1Q8N8E1 139 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
PTPDC1-202ENST00000375360 TRBV6-4A0A1B0GX49 114 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 SOCS3O14543 225 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 IGLV1-51P01701 117 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 DEFB105AQ8NG35 78 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 NDUFA1O15239 70 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 NDUFA7O95182 113 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 CNFNQ9BYD5 112 aa13.12□□□□□ -0.31
PTPDC1-202ENST00000375360 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
PTPDC1-202ENST00000375360 TSHBP01222 138 aa13.11□□□□□ -0.31
PTPDC1-202ENST00000375360 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
PTPDC1-202ENST00000375360 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
PTPDC1-202ENST00000375360 URB1-AS1Q96HZ7 61 aa13.1□□□□□ -0.31
PTPDC1-202ENST00000375360 ANAPC13Q9BS18 74 aa13.1□□□□□ -0.31
PTPDC1-202ENST00000375360 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
PTPDC1-202ENST00000375360 INAFM2P0DMQ5 153 aa13.09□□□□□ -0.31
PTPDC1-202ENST00000375360 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
PTPDC1-202ENST00000375360 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
PTPDC1-202ENST00000375360 FRYLO94915 3013 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 WFDC2Q14508 124 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 CHCHD10Q8WYQ3 142 aaPredicted RBP13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 EYSQ5T1H1 3165 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 NCR3O14931 201 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 RBX1P62877 108 aa13.08□□□□□ -0.32
PTPDC1-202ENST00000375360 BRI3O95415 125 aa13.07□□□□□ -0.32
PTPDC1-202ENST00000375360 C1orf158Q8N1D5 194 aa13.07□□□□□ -0.32
PTPDC1-202ENST00000375360 HAMPP81172 84 aa13.07□□□□□ -0.32
PTPDC1-202ENST00000375360 LINC00526Q96FQ7 95 aa13.07□□□□□ -0.32
PTPDC1-202ENST00000375360 SPATA25Q9BR10 227 aa13.05□□□□□ -0.32
PTPDC1-202ENST00000375360 CLEC2BQ92478 149 aa13.05□□□□□ -0.32
PTPDC1-202ENST00000375360 RETNQ9HD89 108 aa13.05□□□□□ -0.32
PTPDC1-202ENST00000375360 SPEGQ15772 3267 aa13.05□□□□□ -0.32
PTPDC1-202ENST00000375360 FREM2Q5SZK8 3169 aa13.04□□□□□ -0.32
PTPDC1-202ENST00000375360 SETXQ7Z333 2677 aaKnown RBP13.04□□□□□ -0.32
PTPDC1-202ENST00000375360 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
PTPDC1-202ENST00000375360 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
PTPDC1-202ENST00000375360 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
PTPDC1-202ENST00000375360 KPRPQ5T749 579 aaPredicted RBP13.03□□□□□ -0.32
PTPDC1-202ENST00000375360 ETDCA0A1B0GVM5 59 aa13.02□□□□□ -0.32
PTPDC1-202ENST00000375360 TMEM223A0PJW6 202 aa13.02□□□□□ -0.32
PTPDC1-202ENST00000375360 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
PTPDC1-202ENST00000375360 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
PTPDC1-202ENST00000375360 PIK3CD-AS1Q5SR53 167 aa13.02□□□□□ -0.33
PTPDC1-202ENST00000375360 LECT2O14960 151 aa13.01□□□□□ -0.33
PTPDC1-202ENST00000375360 LINC01620Q4KN68 170 aa13.01□□□□□ -0.33
PTPDC1-202ENST00000375360 ANKRD29Q8N6D5 301 aa13.01□□□□□ -0.33
PTPDC1-202ENST00000375360 CLUHP3Q96NS8 147 aa13.01□□□□□ -0.33
PTPDC1-202ENST00000375360 PTH2Q96A98 100 aa13.01□□□□□ -0.33
PTPDC1-202ENST00000375360 DSCR8Q96T75 97 aa13□□□□□ -0.33
PTPDC1-202ENST00000375360 XAGE1AQ9HD64 81 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms