RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 ADAMTS9Q9P2N4 1935 aa14.82□□□□□ -0.04
COL15A1-201ENST00000375001 TMEM131Q92545 1883 aa14.81□□□□□ -0.04
COL15A1-201ENST00000375001 Q6ZQY7 126 aa14.81□□□□□ -0.04
COL15A1-201ENST00000375001 Q6ZS46 218 aa14.8□□□□□ -0.04
COL15A1-201ENST00000375001 LINC00574Q9H8X3 128 aa14.79□□□□□ -0.04
COL15A1-201ENST00000375001 LYRM9A8MSI8 78 aa14.79□□□□□ -0.04
COL15A1-201ENST00000375001 MIFP14174 115 aa14.79□□□□□ -0.04
COL15A1-201ENST00000375001 Q8N9L7 120 aa14.79□□□□□ -0.04
COL15A1-201ENST00000375001 M0QY20 66 aa14.79□□□□□ -0.04
COL15A1-201ENST00000375001 POM121L12Q8N7R1 296 aa14.78□□□□□ -0.04
COL15A1-201ENST00000375001 FAM30AQ9NZY2 134 aa14.78□□□□□ -0.04
COL15A1-201ENST00000375001 Q6JHZ5 121 aa14.77□□□□□ -0.04
COL15A1-201ENST00000375001 C22orf34Q6ZV56 151 aa14.77□□□□□ -0.04
COL15A1-201ENST00000375001 ADORA2A-AS1P86434 159 aa14.77□□□□□ -0.05
COL15A1-201ENST00000375001 SERP1Q9Y6X1 66 aa14.77□□□□□ -0.05
COL15A1-201ENST00000375001 RETNQ9HD89 108 aa14.76□□□□□ -0.05
COL15A1-201ENST00000375001 ACACBO00763 2458 aa14.76□□□□□ -0.05
COL15A1-201ENST00000375001 LINC01548A6NM66 108 aa14.76□□□□□ -0.05
COL15A1-201ENST00000375001 FAM222AQ5U5X8 452 aa14.76□□□□□ -0.05
COL15A1-201ENST00000375001 MRPS36P82909 103 aaKnown RBP14.75□□□□□ -0.05
COL15A1-201ENST00000375001 PROK1P58294 105 aa14.75□□□□□ -0.05
COL15A1-201ENST00000375001 FAM19A5Q7Z5A7 132 aaPredicted RBP14.75□□□□□ -0.05
COL15A1-201ENST00000375001 C4orf3Q8WVX3 66 aa14.75□□□□□ -0.05
COL15A1-201ENST00000375001 SMIM11BQ8TCY0 68 aa14.75□□□□□ -0.05
COL15A1-201ENST00000375001 C9orf85Q96MD7 179 aa14.74□□□□□ -0.05
COL15A1-201ENST00000375001 CSPG4Q6UVK1 2322 aa14.74□□□□□ -0.05
COL15A1-201ENST00000375001 A0A087WVE0 104 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 LINC00526Q96FQ7 95 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 TMEM89A2RUT3 159 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 IGF2-ASQ6U949 168 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 Q8N976 141 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 TANC2Q9HCD6 1990 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 CELA1Q9UNI1 258 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 J3QKU1 62 aa14.73□□□□□ -0.05
COL15A1-201ENST00000375001 ODF3Q96PU9 254 aa14.72□□□□□ -0.05
COL15A1-201ENST00000375001 EBI3Q14213 229 aa14.72□□□□□ -0.05
COL15A1-201ENST00000375001 KIAA1549Q9HCM3 1950 aa14.72□□□□□ -0.05
COL15A1-201ENST00000375001 NRGNQ92686 78 aa14.72□□□□□ -0.05
COL15A1-201ENST00000375001 A0A087WZ39 114 aa14.72□□□□□ -0.05
COL15A1-201ENST00000375001 C2CD3Q4AC94 2353 aa14.71□□□□□ -0.05
COL15A1-201ENST00000375001 NRACQ8N912 160 aa14.71□□□□□ -0.05
COL15A1-201ENST00000375001 IGHV4-30-4P0DP06 118 aa14.71□□□□□ -0.06
COL15A1-201ENST00000375001 IGHV4-31P0DP07 118 aa14.71□□□□□ -0.06
COL15A1-201ENST00000375001 IGKV2-28A0A075B6P5 120 aa14.7□□□□□ -0.06
COL15A1-201ENST00000375001 IGKV2D-28P01615 120 aa14.7□□□□□ -0.06
COL15A1-201ENST00000375001 MYCNOSP40205 109 aa14.7□□□□□ -0.06
COL15A1-201ENST00000375001 MUC6Q6W4X9 2439 aa14.7□□□□□ -0.06
COL15A1-201ENST00000375001 NANOS2P60321 138 aaKnown RBP14.7□□□□□ -0.06
COL15A1-201ENST00000375001 PYGO1Q9Y3Y4 419 aa14.7□□□□□ -0.06
COL15A1-201ENST00000375001 TRAV7A0A075B6U4 112 aa14.69□□□□□ -0.06
COL15A1-201ENST00000375001 COL4A4P53420 1690 aaPredicted RBP14.69□□□□□ -0.06
COL15A1-201ENST00000375001 TECTAO75443 2155 aa14.69□□□□□ -0.06
COL15A1-201ENST00000375001 NUP210LQ5VU65 1888 aa14.69□□□□□ -0.06
COL15A1-201ENST00000375001 IGLV2-11P01706 119 aa14.69□□□□□ -0.06
COL15A1-201ENST00000375001 KLK5Q9Y337 293 aaPredicted RBP14.69□□□□□ -0.06
COL15A1-201ENST00000375001 TRBV6-8A0A0A6YYG3 113 aa14.68□□□□□ -0.06
COL15A1-201ENST00000375001 K7EQG2 157 aa14.68□□□□□ -0.06
COL15A1-201ENST00000375001 GAS8-AS1O95177 125 aa14.68□□□□□ -0.06
COL15A1-201ENST00000375001 DEFB113Q30KQ7 82 aa14.68□□□□□ -0.06
COL15A1-201ENST00000375001 TSHBP01222 138 aa14.67□□□□□ -0.06
COL15A1-201ENST00000375001 A6NDX4 124 aa14.67□□□□□ -0.06
COL15A1-201ENST00000375001 SMAD5-AS1Q9Y6J3 95 aa14.67□□□□□ -0.06
COL15A1-201ENST00000375001 ODF3BA8MYP8 253 aa14.67□□□□□ -0.06
COL15A1-201ENST00000375001 SPINK6Q6UWN8 80 aa14.67□□□□□ -0.06
COL15A1-201ENST00000375001 CRIP2P52943 208 aaPredicted RBP14.66□□□□□ -0.06
COL15A1-201ENST00000375001 PPDPFQ9H3Y8 114 aa14.66□□□□□ -0.06
COL15A1-201ENST00000375001 LTBP2Q14767 1821 aa14.65□□□□□ -0.06
COL15A1-201ENST00000375001 LOC107984640A0A0U1RRK4 108 aa14.65□□□□□ -0.06
COL15A1-201ENST00000375001 LINC00310P59036 64 aa14.65□□□□□ -0.06
COL15A1-201ENST00000375001 Q8NA96 180 aa14.65□□□□□ -0.06
COL15A1-201ENST00000375001 PSPHP1O15172 72 aa14.64□□□□□ -0.07
COL15A1-201ENST00000375001 DAZAP2Q15038 168 aaPredicted RBP14.63□□□□□ -0.07
COL15A1-201ENST00000375001 HCFC1P51610 2035 aa14.63□□□□□ -0.07
COL15A1-201ENST00000375001 NOTCH2Q04721 2471 aa14.63□□□□□ -0.07
COL15A1-201ENST00000375001 PTPN13Q12923 2485 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 CRYGDP07320 174 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 WFDC10AQ9H1F0 79 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 NTM-AS1Q6ZSK4 140 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 SYCNQ0VAF6 134 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 C14orf177Q52M58 125 aa14.62□□□□□ -0.07
COL15A1-201ENST00000375001 KIR2DL5BQ8NHK3 375 aa14.61□□□□□ -0.07
COL15A1-201ENST00000375001 CSDC2Q9Y534 153 aaKnown RBP14.61□□□□□ -0.07
COL15A1-201ENST00000375001 C11orf21Q9P2W6 132 aa14.6□□□□□ -0.07
COL15A1-201ENST00000375001 RNASE3P12724 160 aaKnown RBP14.6□□□□□ -0.07
COL15A1-201ENST00000375001 UBE2D4Q9Y2X8 147 aa14.6□□□□□ -0.07
COL15A1-201ENST00000375001 LINC00208Q96KT6 92 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 SONP18583 2426 aaKnown RBP14.59□□□□□ -0.07
COL15A1-201ENST00000375001 C11orf45Q8TAV5 145 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 CUL9Q8IWT3 2517 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 FBXL19-AS1Q494R0 122 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 LMO4P61968 165 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 LY6LH3BQJ8 138 aa14.59□□□□□ -0.07
COL15A1-201ENST00000375001 POLR2KP53803 58 aaKnown RBP14.59□□□□□ -0.07
COL15A1-201ENST00000375001 M0R378 163 aa14.58□□□□□ -0.07
COL15A1-201ENST00000375001 DHRS4-AS1Q9P1J3 65 aa14.58□□□□□ -0.07
COL15A1-201ENST00000375001 TRBV6-4A0A1B0GX49 114 aa14.58□□□□□ -0.08
COL15A1-201ENST00000375001 PRYO14603 147 aa14.57□□□□□ -0.08
COL15A1-201ENST00000375001 ZNF73O43830 326 aaPredicted RBP14.57□□□□□ -0.08
COL15A1-201ENST00000375001 Q6ZSV7 163 aa14.57□□□□□ -0.08
COL15A1-201ENST00000375001 UBE2D1P51668 147 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms