RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 C9orf85Q96MD7 179 aa12.97□□□□□ -0.33
TRAF3IP1-201ENST00000373327 IGIPA6NJ69 53 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CRPP02741 224 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TRBV20-1A0A075B6N2 111 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CKS1BP61024 79 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 CRLF1O75462 422 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 PLA2G2AP14555 144 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 PPDPFLQ8WWR9 84 aa12.96□□□□□ -0.33
TRAF3IP1-201ENST00000373327 K7EQD1 137 aa12.96□□□□□ -0.34
TRAF3IP1-201ENST00000373327 NFE4Q86UQ8 179 aa12.96□□□□□ -0.34
TRAF3IP1-201ENST00000373327 A0A0J9YXY3 114 aa12.95□□□□□ -0.34
TRAF3IP1-201ENST00000373327 Q6ZSN1 163 aa12.95□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ZMAT4Q9H898 229 aa12.95□□□□□ -0.34
TRAF3IP1-201ENST00000373327 SPANXA1Q9NS26 97 aa12.95□□□□□ -0.34
TRAF3IP1-201ENST00000373327 CUBNO60494 3623 aa12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RS1O15537 224 aa12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 CARD19Q96LW7 228 aa12.94□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ANKRD29Q8N6D5 301 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 HERVK_113P63121 156 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 DEFB135Q30KP9 77 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 SLC25A29Q8N8R3 303 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 GYPEP15421 78 aa12.93□□□□□ -0.34
TRAF3IP1-201ENST00000373327 LINC00482Q8N8I6 264 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 VSIG2Q96IQ7 327 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ANAPC13Q9BS18 74 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 IGHV1-58A0A0C4DH39 117 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ODF3L2Q3SX64 289 aa12.92□□□□□ -0.34
TRAF3IP1-201ENST00000373327 FBN2P35556 2912 aa12.91□□□□□ -0.34
TRAF3IP1-201ENST00000373327 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
TRAF3IP1-201ENST00000373327 GAGE2EQ4V326 116 aa12.91□□□□□ -0.34
TRAF3IP1-201ENST00000373327 GAGE2DQ9UEU5 116 aa12.91□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ANGP03950 147 aaKnown RBP12.91□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1BA6NDE4 496 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1EA6NEQ0 496 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 RBMY1DP0C7P1 496 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 UBE2WQ96B02 151 aa12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 ODF3Q96PU9 254 aa12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 KIF25-AS1Q9Y6Z4 181 aa12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 LINC01006Q8NI28 216 aa12.9□□□□□ -0.34
TRAF3IP1-201ENST00000373327 DAD1P61803 113 aa12.89□□□□□ -0.35
TRAF3IP1-201ENST00000373327 FOXI1Q12951 378 aa12.89□□□□□ -0.35
TRAF3IP1-201ENST00000373327 UFSP1Q6NVU6 142 aa12.89□□□□□ -0.35
TRAF3IP1-201ENST00000373327 LINC00315P59091 139 aa12.89□□□□□ -0.35
TRAF3IP1-201ENST00000373327 UBR5O95071 2799 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP1-201ENST00000373327 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
TRAF3IP1-201ENST00000373327 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
TRAF3IP1-201ENST00000373327 CELSR2Q9HCU4 2923 aa12.88□□□□□ -0.35
TRAF3IP1-201ENST00000373327 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
TRAF3IP1-201ENST00000373327 ICOSQ9Y6W8 199 aa12.88□□□□□ -0.35
TRAF3IP1-201ENST00000373327 MGAM2Q2M2H8 2515 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 IGHV3-30P01768 117 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 IGHV3-30-5P0DP03 117 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
TRAF3IP1-201ENST00000373327 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 SS18Q15532 418 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 GAGE2AQ6NT46 116 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 TEN1Q86WV5 123 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 MAST4O15021 2626 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 TMEM86BQ8N661 226 aa12.86□□□□□ -0.35
TRAF3IP1-201ENST00000373327 ZNF575Q86XF7 245 aa12.85□□□□□ -0.35
TRAF3IP1-201ENST00000373327 DNAJC30Q96LL9 226 aa12.85□□□□□ -0.35
TRAF3IP1-201ENST00000373327 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
TRAF3IP1-201ENST00000373327 S100A7L2Q5SY68 101 aa12.84□□□□□ -0.35
TRAF3IP1-201ENST00000373327 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
TRAF3IP1-201ENST00000373327 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 TEX49A0A1B0GTD5 131 aa12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 MIR7-3HGQ8N6C7 128 aa12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP1-201ENST00000373327 IGHV3-33P01772 117 aa12.82□□□□□ -0.36
TRAF3IP1-201ENST00000373327 RNF152Q8N8N0 203 aa12.82□□□□□ -0.36
TRAF3IP1-201ENST00000373327 INAFM1C9JVW0 142 aa12.82□□□□□ -0.36
TRAF3IP1-201ENST00000373327 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
TRAF3IP1-201ENST00000373327 TRIAP1O43715 76 aa12.82□□□□□ -0.36
TRAF3IP1-201ENST00000373327 Q9HAA7 133 aa12.81□□□□□ -0.36
TRAF3IP1-201ENST00000373327 C1orf158Q8N1D5 194 aa12.81□□□□□ -0.36
TRAF3IP1-201ENST00000373327 SND1-IT1Q9HBX3 110 aa12.81□□□□□ -0.36
TRAF3IP1-201ENST00000373327 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
TRAF3IP1-201ENST00000373327 TINCRA0A1B0GVN0 87 aa12.79□□□□□ -0.36
TRAF3IP1-201ENST00000373327 ADAMTSL4-AS1Q5T5F5 129 aa12.79□□□□□ -0.36
TRAF3IP1-201ENST00000373327 FAM19A4Q96LR4 140 aa12.79□□□□□ -0.36
TRAF3IP1-201ENST00000373327 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
TRAF3IP1-201ENST00000373327 COX6A2Q02221 97 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms