RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 C9orf129Q5T035 196 aaKnown RBP6.46□□□□□ -1.38
SMARCA1-203ENST00000371123 DCANP1Q8TF63 244 aa6.46□□□□□ -1.38
SMARCA1-203ENST00000371123 NXPH4O95158 308 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 ATXN8Q156A1 80 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 C2orf82Q6UX34 121 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 FAM110DQ8TAY7 271 aaPredicted RBP6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 WIPF1O43516 503 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 POLR2KP53803 58 aaKnown RBP6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 ZFAND2AQ8N6M9 145 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 A0A0J9YXY3 114 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 DEFB112Q30KQ8 113 aa6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 DAZ1Q9NQZ3 744 aaKnown RBP6.45□□□□□ -1.38
SMARCA1-203ENST00000371123 TRAV25A0A0B4J276 109 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 I3L3M4 83 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 UBE2L6O14933 153 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 WFDC11Q8NEX6 87 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 COL6A5A8TX70 2615 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 DEFB4AO15263 64 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 COX6CP09669 75 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 SUMO4Q6EEV6 95 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 C9orf139Q6ZV77 190 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 PMVKQ15126 192 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 NIPBLQ6KC79 2804 aaeCLIP6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 M0R1W7 72 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 VCYO14598 125 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 UPK3BQ9BT76 320 aa6.44□□□□□ -1.38
SMARCA1-203ENST00000371123 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 IGHV1-69P01742 117 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 MINOS1Q5TGZ0 78 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 C18orf65Q6ZTR6 163 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 C5orf38Q86SI9 138 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 LST1O00453 97 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 C9orf153Q5TBE3 101 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 LYRM7Q5U5X0 104 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 TRBV7-1A0A0A6YYK4 115 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 LINC00158P58513 81 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 Q8N2B8 174 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 TIMM21Q9BVV7 248 aa6.43□□□□□ -1.38
SMARCA1-203ENST00000371123 KMT2BQ9UMN6 2715 aaPredicted RBP6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 hADV29S1A0JD25 119 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 OVOL1O14753 267 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 Q9UF83 564 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 IGSF10Q6WRI0 2623 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 IGHG2P01859 326 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 HIVEP1P15822 2718 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 PRIMA1Q86XR5 153 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
SMARCA1-203ENST00000371123 LEPROTO15243 131 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 FAM218AQ96MZ4 157 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 RNF5Q99942 180 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 STHQ8IWL8 128 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 LRRC75A-AS1Q8N1F1 130 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 TMEM190Q8WZ59 177 aa6.41□□□□□ -1.38
SMARCA1-203ENST00000371123 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.38
SMARCA1-203ENST00000371123 NPBQ8NG41 125 aa6.4□□□□□ -1.38
SMARCA1-203ENST00000371123 DSCR8Q96T75 97 aa6.4□□□□□ -1.38
SMARCA1-203ENST00000371123 A0A1B0GX51 115 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 MSMBP08118 114 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 IGLV10-54A0A075B6I4 117 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 PAX4O43316 350 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 RHOHQ15669 191 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 PRORYQ9H606 182 aa6.4□□□□□ -1.39
SMARCA1-203ENST00000371123 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 UQCRQO14949 82 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 AVPP01185 164 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 ITPR2Q14571 2701 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 IGHV1OR15-1A0A075B7D0 117 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 CRYGAP11844 174 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 IGHV4OR15-8A0A075B7B6 117 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 A0A087WW49 117 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 H3BT86 120 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 ZNF415Q09FC8 603 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 HRCT1Q6UXD1 115 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 WFDC10AQ9H1F0 79 aa6.39□□□□□ -1.39
SMARCA1-203ENST00000371123 SETXQ7Z333 2677 aaKnown RBP6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 DNAL4O96015 105 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 PLA2G2AP14555 144 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 COX7CP15954 63 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 LMO4P61968 165 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 CIRBPQ14011 172 aaKnown RBP6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 GAGE2AQ6NT46 116 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 J3KT08 172 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 SOCS3O14543 225 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 Q9HAA7 133 aa6.38□□□□□ -1.39
SMARCA1-203ENST00000371123 IGLV4-3A0A075B6K6 122 aa6.37□□□□□ -1.39
SMARCA1-203ENST00000371123 A0A087WVE0 104 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms