RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 COL12A1Q99715 3063 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 E9PLD3 99 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 K7EMT4 169 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 AKAP9Q99996 3911 aa6.79□□□□□ -1.32
SMARCA1-202ENST00000371122 CLPSL1A2RUU4 121 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 INAFM1C9JVW0 142 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 HHLA3Q9XRX5 114 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 K7EQD1 137 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 BAALC-AS2P0C853 105 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 Q6ZSV7 163 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 FAM110AQ9BQ89 295 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 EBI3Q14213 229 aa6.78□□□□□ -1.32
SMARCA1-202ENST00000371122 LOC100131303A0A0U1RQF7 123 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 NDUFA7O95182 113 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 PRB2P02812 416 aaPredicted RBP6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 TEX15Q9BXT5 2789 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 TAL2Q16559 108 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 ANKRD29Q8N6D5 301 aa6.77□□□□□ -1.33
SMARCA1-202ENST00000371122 IGHV4-28A0A0C4DH34 117 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 IGKV3D-7A0A0C4DH55 119 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 F8W735 103 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 PIK3CD-AS1Q5SR53 167 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 Q8N6K4 173 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 SLC25A29Q8N8R3 303 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 B5MCH6 92 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 NBEAL1Q6ZS30 2694 aa6.76□□□□□ -1.33
SMARCA1-202ENST00000371122 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 ZNF843Q8N446 348 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 SPANXA1Q9NS26 97 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 APOC4P55056 127 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 ITPR1Q14643 2758 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 SOCS3O14543 225 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 NCR3O14931 201 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 TCL1BO95988 128 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 PLA2G2AP14555 144 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 NFE4Q86UQ8 179 aa6.75□□□□□ -1.33
SMARCA1-202ENST00000371122 LECT2O14960 151 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 NRACQ8N912 160 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 M0QY20 66 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 Q6YL49 198 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 TIMM17AQ99595 171 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 ZNF580Q9UK33 172 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
SMARCA1-202ENST00000371122 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 INSL3P51460 131 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 SLPIP03973 132 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 PSMB8P28062 276 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 MRGPRG-AS1Q2M3A8 158 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 A0A0J9YXY3 114 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
SMARCA1-202ENST00000371122 MRPS12O15235 138 aaKnown RBP6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 C9orf153Q5TBE3 101 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 COX7B2Q8TF08 81 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 C16orf74Q96GX8 76 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 CRIP2P52943 208 aaPredicted RBP6.72□□□□□ -1.33
SMARCA1-202ENST00000371122 TEN1Q86WV5 123 aa6.71□□□□□ -1.33
SMARCA1-202ENST00000371122 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.33
SMARCA1-202ENST00000371122 HIGD1BQ9P298 99 aa6.71□□□□□ -1.33
SMARCA1-202ENST00000371122 COX7A2LO14548 114 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 SPART-AS1P0CW21 52 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 RPL18AQ02543 176 aaKnown RBP6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 FOXI1Q12951 378 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 BBC3Q96PG8 261 aaPredicted RBP6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 ZNF702PQ9H963 129 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 SS18L2Q9UHA2 77 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 DCANP1Q8TF63 244 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 FSTL3O95633 263 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 CRYGDP07320 174 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 LINC01006Q8NI28 216 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 C1orf43Q9BWL3 253 aa6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
SMARCA1-202ENST00000371122 NOTCH1P46531 2555 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 LGALS9O00182 355 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 CFAP126Q5VTH2 177 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 DNAJC30Q96LL9 226 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 A0A096LNJ9 63 aa6.7□□□□□ -1.34
SMARCA1-202ENST00000371122 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms