RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SLC25A21Q9BQT8 299 aaPredicted RBP2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 GGACTQ9BVM4 153 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 SLC39A9Q9NUM3 307 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 RSL24D1Q9UHA3 163 aaKnown RBP2.91□□□□□ -1.94
RNU4-39P-201ENST00000362455 TRAV8-3A0A0A6YYJ7 113 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 IGHV3-73A0A0B4J1V6 119 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 FABP12A6NFH5 140 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 FAM24AA6NFZ4 105 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 C9JCJ5 164 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 CST7O76096 145 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 LINC00694P0DN24 101 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 ASIPP42127 132 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 IAH1Q2TAA2 248 aaPredicted RBP2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 TDRG1Q3Y452 100 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 LELP1Q5T871 98 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 Q6AWC8 147 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 MIR17HGQ75NE6 70 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 S100A7AQ86SG5 101 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 MCFD2Q8NI22 146 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 TXNDC17Q9BRA2 123 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 PRELID1Q9Y255 219 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 LPAP08519 4548 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 MUC2Q02817 5179 aa2.9□□□□□ -1.95
RNU4-39P-201ENST00000362455 PIGBOS1A0A0B4J2F0 54 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 IGSF23A1L1A6 192 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 NDUFB6O95139 128 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 TYMSP04818 313 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 NBEAP1P0C6P0 100 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 RAB31Q13636 194 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 PDE6HQ13956 83 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 TMEM78Q5T7P6 136 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 CFAP126Q5VTH2 177 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 TOMM5Q8N4H5 51 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 GTSF1LQ9H1H1 148 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 GSKIPQ9P0R6 139 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 TIMM9Q9Y5J7 89 aa2.89□□□□□ -1.95
RNU4-39P-201ENST00000362455 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 TRBV6-4A0A1B0GX49 114 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 M0R2P5 195 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 OR10J4P0C629 311 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 ZNF80P51504 273 aaPredicted RBP2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 RANP62826 216 aaKnown RBP2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 PYDC2Q56P42 97 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 ZFP82Q8N141 532 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 ATP6V0E2Q8NHE4 81 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 MRAP2Q96G30 205 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 UQCC1Q9NVA1 299 aa2.88□□□□□ -1.95
RNU4-39P-201ENST00000362455 TRAV8-1A0A0A6YYK1 113 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 UBE2L5PA0A1B0GUS4 154 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 RBAKDNA6NC62 111 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 F6UZH7 168 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 K7ERS5 55 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 RNASE3P12724 160 aaKnown RBP2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 FAUP35544 74 aaKnown RBP2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 TMBIM6P55061 237 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 SDIM1Q6ZPB5 146 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 NIT1Q86X76 327 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 C12orf45Q8N5I9 185 aaPredicted RBP2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 TMEM75Q8N9X5 138 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 PFDN5Q99471 154 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 NPCDR1Q9BY65 106 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 NAGKQ9UJ70 344 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 LSM5Q9Y4Y9 91 aaKnown RBP2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 URGCP-MRPS24S4R325 110 aa2.87□□□□□ -1.95
RNU4-39P-201ENST00000362455 PLA2G10O15496 165 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 NDUFS6O75380 124 aaKnown RBP2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 FGF7P21781 194 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 S100A11P31949 105 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 SULT1A1P50225 295 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 AP3S2P59780 193 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 RHOHQ15669 191 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 ACOT6Q3I5F7 207 aaPredicted RBP2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 KRTAP26-1Q6PEX3 210 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 ENHOQ6UWT2 76 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 Q6ZRU5 148 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 PRADC1Q9BSG0 188 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 MRPS26Q9BYN8 205 aaKnown RBP2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 LYRM2Q9NU23 88 aaPredicted RBP2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 LENEPQ9Y5L5 61 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 TRAPPC1Q9Y5R8 145 aa2.86□□□□□ -1.95
RNU4-39P-201ENST00000362455 TRAV21A0A0B4J279 112 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 H3BQ85 93 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 INPP1P49441 399 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 GNG5P63218 68 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 CIRBPQ14011 172 aaKnown RBP2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 FAM162BQ5T6X4 162 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 ADM2Q7Z4H4 148 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 C9orf163Q8N9P6 203 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 OR2T35Q8NGX2 323 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 PTH2Q96A98 100 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 C2orf50Q96LR7 162 aa2.85□□□□□ -1.95
RNU4-39P-201ENST00000362455 HYLS1Q96M11 299 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms