RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HTN3P15516 51 aa14.65□□□□□ -0.06
MAP1LC3A-201ENST00000360668 BOD1L2Q8IYS8 172 aa14.65□□□□□ -0.06
MAP1LC3A-201ENST00000360668 UBE2D4Q9Y2X8 147 aa14.65□□□□□ -0.06
MAP1LC3A-201ENST00000360668 A0A0J9YY99 117 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 ZC2HC1BQ5TFG8 222 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 TIMM21Q9BVV7 248 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 HUWE1Q7Z6Z7 4374 aaKnown RBP14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 TENM3Q9P273 2699 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 IGLV4-3A0A075B6K6 122 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 TRBV25-1A0A075B6N4 114 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 C11orf45Q8TAV5 145 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 TMEM243Q9BU79 118 aa14.64□□□□□ -0.07
MAP1LC3A-201ENST00000360668 TRBV6-8A0A0A6YYG3 113 aa14.63□□□□□ -0.07
MAP1LC3A-201ENST00000360668 FGF6P10767 208 aa14.63□□□□□ -0.07
MAP1LC3A-201ENST00000360668 SMAGPQ0VAQ4 97 aa14.63□□□□□ -0.07
MAP1LC3A-201ENST00000360668 Q6ZTC4 211 aa14.63□□□□□ -0.07
MAP1LC3A-201ENST00000360668 H7C423 109 aa14.62□□□□□ -0.07
MAP1LC3A-201ENST00000360668 OPRPNQ99935 248 aaPredicted RBP14.61□□□□□ -0.07
MAP1LC3A-201ENST00000360668 B9D2Q9BPU9 175 aa14.61□□□□□ -0.07
MAP1LC3A-201ENST00000360668 VCX2Q9H322 139 aa14.61□□□□□ -0.07
MAP1LC3A-201ENST00000360668 H3BNG1 76 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 MRPL23Q16540 153 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 SH2D6Q7Z4S9 175 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 FAM104AQ969W3 186 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 CSDC2Q9Y534 153 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 EREGO14944 169 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 NANOS2P60321 138 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 MRPS36P82909 103 aaKnown RBP14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 CEMP1Q6PRD7 247 aaPredicted RBP14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 AMELXQ99217 191 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 ICOSQ9Y6W8 199 aa14.6□□□□□ -0.07
MAP1LC3A-201ENST00000360668 UBE2L6O14933 153 aa14.59□□□□□ -0.07
MAP1LC3A-201ENST00000360668 NFE4Q86UQ8 179 aa14.59□□□□□ -0.07
MAP1LC3A-201ENST00000360668 IGLV4-69A0A075B6H9 119 aa14.58□□□□□ -0.08
MAP1LC3A-201ENST00000360668 NMUP48645 174 aa14.58□□□□□ -0.08
MAP1LC3A-201ENST00000360668 DGAT2L7PQ6IED9 249 aa14.57□□□□□ -0.08
MAP1LC3A-201ENST00000360668 DNAH9Q9NYC9 4486 aa14.57□□□□□ -0.08
MAP1LC3A-201ENST00000360668 A0A096LPF7 62 aa14.56□□□□□ -0.08
MAP1LC3A-201ENST00000360668 IGKV2D-26A0A0A0MRZ7 120 aa14.56□□□□□ -0.08
MAP1LC3A-201ENST00000360668 E9PLD3 99 aa14.56□□□□□ -0.08
MAP1LC3A-201ENST00000360668 Q6ZUT4 128 aa14.56□□□□□ -0.08
MAP1LC3A-201ENST00000360668 C2orf91Q6ZV80 131 aa14.56□□□□□ -0.08
MAP1LC3A-201ENST00000360668 DEFB131BA0A096LNP1 70 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 C11orf86A6NJI1 115 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 ZNF25P17030 456 aaPredicted RBP14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 AMMECR1LQ6DCA0 310 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 PCP2Q8IVA1 136 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 CHCHD5Q9BSY4 110 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 HIGD1BQ9P298 99 aa14.55□□□□□ -0.08
MAP1LC3A-201ENST00000360668 HERVK_113P61574 105 aa14.54□□□□□ -0.08
MAP1LC3A-201ENST00000360668 TMEM101Q96IK0 257 aa14.54□□□□□ -0.08
MAP1LC3A-201ENST00000360668 GAGE6Q13070 117 aa14.53□□□□□ -0.08
MAP1LC3A-201ENST00000360668 COL5A1-AS1Q5SY13 56 aa14.53□□□□□ -0.08
MAP1LC3A-201ENST00000360668 OR5A1Q8NGJ0 315 aa14.53□□□□□ -0.08
MAP1LC3A-201ENST00000360668 TRAV10A0A0B4J240 114 aa14.51□□□□□ -0.09
MAP1LC3A-201ENST00000360668 RNASE13Q5GAN3 156 aaKnown RBP14.51□□□□□ -0.09
MAP1LC3A-201ENST00000360668 CDC42SE2Q9NRR3 84 aa14.51□□□□□ -0.09
MAP1LC3A-201ENST00000360668 NHLRC4P0CG21 123 aaPredicted RBP14.5□□□□□ -0.09
MAP1LC3A-201ENST00000360668 HINT1P49773 126 aaPredicted RBP14.5□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TIRAPP58753 221 aa14.5□□□□□ -0.09
MAP1LC3A-201ENST00000360668 BATFQ16520 125 aa14.49□□□□□ -0.09
MAP1LC3A-201ENST00000360668 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TP73-AS1Q9UF72 201 aa14.49□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TCTAP57738 103 aa14.48□□□□□ -0.09
MAP1LC3A-201ENST00000360668 BVES-AS1Q5T3Y7 98 aa14.48□□□□□ -0.09
MAP1LC3A-201ENST00000360668 LELP1Q5T871 98 aa14.48□□□□□ -0.09
MAP1LC3A-201ENST00000360668 CHAC1Q9BUX1 264 aa14.48□□□□□ -0.09
MAP1LC3A-201ENST00000360668 A0A0J9YXV3 536 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 UBE2D1P51668 147 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 HSD52Q0P140 79 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TMEM170BQ5T4T1 132 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TRAV8-6A0A0B4J262 113 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 A0A1B0GUV1 79 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 TINCRA0A1B0GVN0 87 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 MAPKAPK5-AS1Q8N8E1 139 aa14.47□□□□□ -0.09
MAP1LC3A-201ENST00000360668 MYMXA0A1B0GTQ4 84 aa14.46□□□□□ -0.09
MAP1LC3A-201ENST00000360668 LYPD5Q6UWN5 251 aa14.46□□□□□ -0.09
MAP1LC3A-201ENST00000360668 COL7A1Q02388 2944 aa14.46□□□□□ -0.1
MAP1LC3A-201ENST00000360668 IGLV4-60A0A075B6I1 120 aa14.45□□□□□ -0.1
MAP1LC3A-201ENST00000360668 TMEM223A0PJW6 202 aa14.45□□□□□ -0.1
MAP1LC3A-201ENST00000360668 TMEM262E9PQX1 116 aa14.45□□□□□ -0.1
MAP1LC3A-201ENST00000360668 FAM19A3Q7Z5A8 133 aa14.45□□□□□ -0.1
MAP1LC3A-201ENST00000360668 ZNF22P17026 224 aaPredicted RBP14.44□□□□□ -0.1
MAP1LC3A-201ENST00000360668 RBX1P62877 108 aa14.43□□□□□ -0.1
MAP1LC3A-201ENST00000360668 SEC11AP67812 179 aa14.43□□□□□ -0.1
MAP1LC3A-201ENST00000360668 TAL2Q16559 108 aa14.43□□□□□ -0.1
MAP1LC3A-201ENST00000360668 LEPROTO15243 131 aa14.43□□□□□ -0.1
MAP1LC3A-201ENST00000360668 TTTY13Q9BZ97 58 aa14.43□□□□□ -0.1
MAP1LC3A-201ENST00000360668 A0A1B0GV90 55 aa14.42□□□□□ -0.1
MAP1LC3A-201ENST00000360668 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
MAP1LC3A-201ENST00000360668 PLEKHB2Q96CS7 222 aa14.41□□□□□ -0.1
MAP1LC3A-201ENST00000360668 TRAV13-1A0A0B4J241 112 aa14.4□□□□□ -0.1
MAP1LC3A-201ENST00000360668 ORAOV1Q8WV07 137 aa14.4□□□□□ -0.1
MAP1LC3A-201ENST00000360668 GEMIN7Q9H840 131 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3A-201ENST00000360668 HERVK_113P63121 156 aa14.39□□□□□ -0.11
MAP1LC3A-201ENST00000360668 LINC00242Q5T6M2 205 aa14.39□□□□□ -0.11
MAP1LC3A-201ENST00000360668 IGLV5-45A0A087WSX0 123 aa14.39□□□□□ -0.11
MAP1LC3A-201ENST00000360668 ZNF815PA8K554 130 aa14.39□□□□□ -0.11
MAP1LC3A-201ENST00000360668 J3QQQ9 107 aa14.39□□□□□ -0.11
MAP1LC3A-201ENST00000360668 LINC00469Q8N7U9 141 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms