RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.3□□□□□ -1.72
HHLA3-201ENST00000359875 A0A1B0GUT8 65 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 HIGD1CA8MV81 97 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 PRSS1P07477 247 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 CAMPP49913 170 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 CNBPP62633 177 aaKnown RBP4.3□□□□□ -1.72
HHLA3-201ENST00000359875 COTL1Q14019 142 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 PEA15Q15121 130 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 TMEM241Q24JQ0 296 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
HHLA3-201ENST00000359875 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 UBE2L6O14933 153 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 AMTP48728 403 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
HHLA3-201ENST00000359875 REG3AQ06141 175 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 CIRBPQ14011 172 aaKnown RBP4.29□□□□□ -1.72
HHLA3-201ENST00000359875 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 ISOC2Q96AB3 205 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 TMEM191AQ9H0A3 160 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 NAT8Q9UHE5 227 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 V9GYV3 84 aa4.29□□□□□ -1.72
HHLA3-201ENST00000359875 SDHAF1A6NFY7 115 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 NCR2O95944 276 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 RIGQ13278 110 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 ADIRFQ15847 76 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 Q6ZRU5 148 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 C20orf203Q8NBC4 194 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 NUP35Q8NFH5 326 aa4.28□□□□□ -1.72
HHLA3-201ENST00000359875 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
HHLA3-201ENST00000359875 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 IGLV4-60A0A075B6I1 120 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 TRBV6-5A0A0K0K1A5 114 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 C9JQL5 133 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 APCSP02743 223 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 NAT8BQ9UHF3 227 aa4.27□□□□□ -1.73
HHLA3-201ENST00000359875 IGLV10-54A0A075B6I4 117 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 hDV102S1A0JD36 115 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 H7C423 109 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 I3L3M4 83 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 PPP1R17O96001 155 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 RAB4AP20338 218 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 PMCHP20382 165 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 RAB14P61106 215 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
HHLA3-201ENST00000359875 AMMECR1LQ6DCA0 310 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 AMN1Q8IY45 258 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 ST20Q9HBF5 79 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
HHLA3-201ENST00000359875 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 A0A1B0GW15 77 aa4.25□□□□□ -1.73
HHLA3-201ENST00000359875 IGKV2-29A2NJV5 120 aaPredicted RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 POLR2KP53803 58 aaKnown RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 RNASEKQ6P5S7 137 aaKnown RBP4.25□□□□□ -1.73
HHLA3-201ENST00000359875 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
HHLA3-201ENST00000359875 A0A087WYN8 130 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 C7orf77A4D0Y5 90 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 LINC00862A6NCI5 91 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 PANO1I0J062 215 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 PPP1R2P9O14990 202 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 GAS8-AS1O95177 125 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 S100A8P05109 93 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 FGF6P10767 208 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 ESDP10768 282 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 RPS10P46783 165 aaKnown RBP4.24□□□□□ -1.73
HHLA3-201ENST00000359875 HNRNPA3P51991 378 aaKnown RBP4.24□□□□□ -1.73
HHLA3-201ENST00000359875 PNRC1Q12796 327 aaPredicted RBP4.24□□□□□ -1.73
HHLA3-201ENST00000359875 FAM104BQ5XKR9 115 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 C7orf33Q8WU49 177 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 BTF3L4Q96K17 158 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 TMEM242Q9NWH2 141 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 PLAC8Q9NZF1 115 aa4.24□□□□□ -1.73
HHLA3-201ENST00000359875 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 IGKV3OR2-268A0A0C4DH90 116 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 F8W036 122 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 SMKR1H3BMG3 65 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 VCYO14598 125 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 TSHBP01222 138 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 HBBP68871 147 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 SMAGPQ0VAQ4 97 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 MRPL51Q4U2R6 128 aaKnown RBP4.23□□□□□ -1.73
HHLA3-201ENST00000359875 NRACQ8N912 160 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
HHLA3-201ENST00000359875 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 TMEM101Q96IK0 257 aa4.23□□□□□ -1.73
HHLA3-201ENST00000359875 KIR2DL4Q99706 377 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms