RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 IGKV3D-20A0A0C4DH25 116 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 LGALS3P17931 250 aaKnown RBP2.97□□□□□ -1.93
CNGA1-201ENST00000358519 CXCL5P42830 114 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 SUMO2P61956 95 aaKnown RBP2.97□□□□□ -1.93
CNGA1-201ENST00000358519 PAPPA-AS1Q5QFB9 102 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 Q6YL49 198 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 CLEC2BQ92478 149 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 RNF125Q96EQ8 232 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 PYGO1Q9Y3Y4 419 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 ATOX1O00244 68 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 TSHBP01222 138 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 COX6CP09669 75 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 MALP21145 153 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 NSUN5P1Q3KNT7 163 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 PIK3CD-AS1Q5SR53 167 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 SPANXN1Q5VSR9 72 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 BPESC1Q9GZL8 116 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 PRO0628Q9UI54 55 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 ICOSQ9Y6W8 199 aa2.97□□□□□ -1.93
CNGA1-201ENST00000358519 PLCE1Q9P212 2302 aa2.96□□□□□ -1.93
CNGA1-201ENST00000358519 TRAV8-3A0A0A6YYJ7 113 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 TRAV13-1A0A0B4J241 112 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV7-4-1A0A0J9YVY3 117 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 LST1O00453 97 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 DLX1P56177 255 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 HIST1H4AP62805 103 aaKnown RBP2.96□□□□□ -1.94
CNGA1-201ENST00000358519 CFHR3Q02985 330 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 RHOHQ15669 191 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 SDIM1Q6ZPB5 146 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 GPHB5Q86YW7 130 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
CNGA1-201ENST00000358519 CCDC140Q96MF4 163 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 C1orf43Q9BWL3 253 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 C11orf21Q9P2W6 132 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV7-81A0A0B4J1V7 117 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3-72A0A0B4J1Y9 119 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 SAA4P35542 130 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 LINC00336Q6ZUF6 198 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 DYNAPQ8N1N2 210 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 DCANP1Q8TF63 244 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 LINC00467Q9BRT7 94 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 DPH3P1Q9H4G8 78 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 PKD1L1Q8TDX9 2849 aa2.96□□□□□ -1.94
CNGA1-201ENST00000358519 ZNF469Q96JG9 3925 aaPredicted RBP2.96□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV4-4A0A075B6R2 117 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 IGIPA6NJ69 53 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 K7EIM0 57 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 PRSS2P07478 247 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 RPL35AP18077 110 aaKnown RBP2.95□□□□□ -1.94
CNGA1-201ENST00000358519 ZFP36P26651 326 aaKnown RBP2.95□□□□□ -1.94
CNGA1-201ENST00000358519 Q6ZSV7 163 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 DEFB104AQ8WTQ1 72 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 PEMTQ9UBM1 199 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV3-64A0A075B6Q5 118 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 PRAC2D3DTV9 90 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 I3L3M4 83 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV4-31P0DP07 118 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 UBE2E2Q96LR5 201 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 TIMM21Q9BVV7 248 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 AGPAT4-IT1Q9H0P7 198 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 TP53TG1Q9Y2A0 90 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 S4R3C0 116 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 TGP01266 2768 aa2.95□□□□□ -1.94
CNGA1-201ENST00000358519 LEPROTO15243 131 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 EDN2P20800 178 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 COX7A1P24310 79 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 PFN2P35080 140 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 SEC61GP60059 68 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 RPL39P62891 51 aaKnown RBP2.94□□□□□ -1.94
CNGA1-201ENST00000358519 RPL18AQ02543 176 aaKnown RBP2.94□□□□□ -1.94
CNGA1-201ENST00000358519 ZNF876PQ49A33 203 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 APRG1Q8IVJ8 170 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 SMAD5-AS1Q9Y6J3 95 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 ANK2Q01484 3957 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 ARHGAP32A7KAX9 2087 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 NACAE9PAV3 2078 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV4-61A0A0C4DH41 118 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 A0A0J9YXY3 114 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 PPP1R17O96001 155 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 MALRD1Q5VYJ5 2156 aa2.94□□□□□ -1.94
CNGA1-201ENST00000358519 A0A1W2PPR1 153 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 A8MTW9 85 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 M0R381 172 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 DAZ2Q13117 558 aaKnown RBP2.93□□□□□ -1.94
CNGA1-201ENST00000358519 ADAMTSL4-AS1Q5T5F5 129 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 C9orf47Q6ZRZ4 202 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 DAZ4Q86SG3 579 aaKnown RBP2.93□□□□□ -1.94
CNGA1-201ENST00000358519 RNF182Q8N6D2 247 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 MAPK1IP1LQ8NDC0 245 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 DAZ1Q9NQZ3 744 aaKnown RBP2.93□□□□□ -1.94
CNGA1-201ENST00000358519 DAZ3Q9NR90 486 aaKnown RBP2.93□□□□□ -1.94
CNGA1-201ENST00000358519 CADP27708 2225 aa2.93□□□□□ -1.94
CNGA1-201ENST00000358519 IGHV4-30-2A0A087WSY4 118 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms