RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C1orf134Q5TEV5 83 aa7.34□□□□□ -1.23
CHD3-202ENST00000358181 C11orf53Q8IXP5 236 aa7.34□□□□□ -1.23
CHD3-202ENST00000358181 C1orf147Q96MC9 270 aaPredicted RBP7.34□□□□□ -1.23
CHD3-202ENST00000358181 Q8N976 141 aa7.34□□□□□ -1.23
CHD3-202ENST00000358181 LINC00474Q9P2X8 69 aa7.34□□□□□ -1.23
CHD3-202ENST00000358181 C11orf86A6NJI1 115 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 CRIP2P52943 208 aaPredicted RBP7.33□□□□□ -1.24
CHD3-202ENST00000358181 EP400Q96L91 3159 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 BRI3O95415 125 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 ZNF747Q9BV97 191 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 CACNA1HO95180 2353 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
CHD3-202ENST00000358181 LST1O00453 97 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 PROK1P58294 105 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 Q6ZSR3 168 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 Q6ZQY7 126 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 Q6ZS49 121 aa7.32□□□□□ -1.24
CHD3-202ENST00000358181 ATRXP46100 2492 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 I3L2K1 104 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 ZNF73O43830 326 aaPredicted RBP7.31□□□□□ -1.24
CHD3-202ENST00000358181 FXYD2P54710 66 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 MIAQ16674 131 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 MDFIQ99750 246 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 MED12LQ86YW9 2145 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 U3KQK5 164 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 IGLV4-69A0A075B6H9 119 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
CHD3-202ENST00000358181 NCOA6Q14686 2063 aaPredicted RBP7.31□□□□□ -1.24
CHD3-202ENST00000358181 TMEM131Q92545 1883 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 IGLV11-55A0A075B6I3 123 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 CRYGAP11844 174 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 C2orf48Q96LS8 159 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 SPACA4Q8TDM5 124 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 KIAA1549LQ6ZVL6 1849 aa7.3□□□□□ -1.24
CHD3-202ENST00000358181 K7EIM0 57 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 FHL2Q14192 279 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 ACYP2P14621 99 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 MSMPQ1L6U9 139 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 SPANXB1Q9NS25 103 aaPredicted RBP7.29□□□□□ -1.24
CHD3-202ENST00000358181 H3BT86 120 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 C18orf65Q6ZTR6 163 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 A0A0J9YX75 114 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 K7EMT4 169 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 REG3GQ6UW15 175 aa7.29□□□□□ -1.24
CHD3-202ENST00000358181 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 C6orf223Q8N319 242 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 LINC00208Q96KT6 92 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 TRBV6-5A0A0K0K1A5 114 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 M0R378 163 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 FREM1Q5H8C1 2179 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 E7EUB6 86 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 Q6YL49 198 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 PYGO1Q9Y3Y4 419 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 C10orf99Q6UWK7 81 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 FAM19A3Q7Z5A8 133 aa7.28□□□□□ -1.24
CHD3-202ENST00000358181 TRBV6-8A0A0A6YYG3 113 aa7.27□□□□□ -1.24
CHD3-202ENST00000358181 FRMD6-AS1P0C7T7 363 aa7.27□□□□□ -1.24
CHD3-202ENST00000358181 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 PRM2P04554 102 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 CFAP126Q5VTH2 177 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 NEXN-AS1Q8NBZ9 246 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 A0A0J9YXY3 114 aa7.27□□□□□ -1.25
CHD3-202ENST00000358181 DEFB114Q30KQ6 69 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 MUC6Q6W4X9 2439 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 A8MZ25 164 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 PSPHP1O15172 72 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 PCNX3Q9H6A9 2034 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 C19orf71A6NCJ1 209 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 COA6Q5JTJ3 125 aaKnown RBP7.26□□□□□ -1.25
CHD3-202ENST00000358181 Q8N7P7 452 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 PTPRQQ9UMZ3 2332 aa7.26□□□□□ -1.25
CHD3-202ENST00000358181 RNASE3P12724 160 aaKnown RBP7.25□□□□□ -1.25
CHD3-202ENST00000358181 EBI3Q14213 229 aa7.25□□□□□ -1.25
CHD3-202ENST00000358181 E9PLD3 99 aa7.25□□□□□ -1.25
CHD3-202ENST00000358181 Q9UF83 564 aa7.25□□□□□ -1.25
CHD3-202ENST00000358181 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
CHD3-202ENST00000358181 Q8NA96 180 aa7.25□□□□□ -1.25
CHD3-202ENST00000358181 TRBV30A0A0K0K1B3 111 aa7.25□□□□□ -1.25
CHD3-202ENST00000358181 TECTAO75443 2155 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 Q6ZSV7 163 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 Q9BRP9 147 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 CDKN2A-AS1Q9UH64 79 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 PLXNB1O43157 2135 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 CEP192Q8TEP8 1941 aa7.24□□□□□ -1.25
CHD3-202ENST00000358181 LINC00643Q86TS7 51 aa7.23□□□□□ -1.25
CHD3-202ENST00000358181 GDF5OSQ5U4N7 250 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms