RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
CHD4-201ENST00000357008 CSPG4Q6UVK1 2322 aa11.01□□□□□ -0.65
CHD4-201ENST00000357008 XGP55808 180 aa11.01□□□□□ -0.65
CHD4-201ENST00000357008 A8MZ25 164 aa11.01□□□□□ -0.65
CHD4-201ENST00000357008 C11orf21Q9P2W6 132 aa11.01□□□□□ -0.65
CHD4-201ENST00000357008 SORL1Q92673 2214 aa11□□□□□ -0.65
CHD4-201ENST00000357008 TTC28Q96AY4 2481 aa11□□□□□ -0.65
CHD4-201ENST00000357008 C11orf45Q8TAV5 145 aa11□□□□□ -0.65
CHD4-201ENST00000357008 HIVEP2P31629 2446 aa11□□□□□ -0.65
CHD4-201ENST00000357008 CCKP06307 115 aa11□□□□□ -0.65
CHD4-201ENST00000357008 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
CHD4-201ENST00000357008 KIAA1549LQ6ZVL6 1849 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 COX7CP15954 63 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 LINC00310P59036 64 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 XAGE1AQ9HD64 81 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 CNFNQ9BYD5 112 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 Q8N976 141 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 Q6ZS46 218 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 MUC6Q6W4X9 2439 aa10.99□□□□□ -0.65
CHD4-201ENST00000357008 KLLNB2CW77 178 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 PCNX3Q9H6A9 2034 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 MRPS36P82909 103 aaKnown RBP10.98□□□□□ -0.65
CHD4-201ENST00000357008 PRR9Q5T870 116 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 FAM19A1Q7Z5A9 133 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 C2orf16Q68DN1 1984 aa10.98□□□□□ -0.65
CHD4-201ENST00000357008 Q8N6K4 173 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 CCDC179H3BU77 68 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 V9GYY9 64 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
CHD4-201ENST00000357008 LRRC75A-AS1Q8N1F1 130 aa10.97□□□□□ -0.65
CHD4-201ENST00000357008 GAS8-AS1O95177 125 aa10.96□□□□□ -0.65
CHD4-201ENST00000357008 C9orf85Q96MD7 179 aa10.96□□□□□ -0.65
CHD4-201ENST00000357008 CRYGDP07320 174 aa10.96□□□□□ -0.65
CHD4-201ENST00000357008 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.66
CHD4-201ENST00000357008 Q6ZQY7 126 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 C1orf158Q8N1D5 194 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 CD164L2Q6UWJ8 174 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 Q6Q795 121 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 SMIM11BQ8TCY0 68 aa10.95□□□□□ -0.66
CHD4-201ENST00000357008 UBE2D1P51668 147 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 A0A096LNI7 61 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 C19orf84I3L1E1 186 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 CACNA1AO00555 2505 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 SYCNQ0VAF6 134 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 C11orf71Q6IPW1 123 aa10.94□□□□□ -0.66
CHD4-201ENST00000357008 DCANP1Q8TF63 244 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 TECTAO75443 2155 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 PCDH15Q96QU1 1955 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 MIFP14174 115 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 C2CD3Q4AC94 2353 aa10.93□□□□□ -0.66
CHD4-201ENST00000357008 WFDC10BQ8IUB3 73 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 KIR2DL5BQ8NHK3 375 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 SNURFQ9Y675 71 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 SONP18583 2426 aaKnown RBP10.92□□□□□ -0.66
CHD4-201ENST00000357008 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 C3orf84H3BNL1 204 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 Q6JHZ5 121 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 C10orf99Q6UWK7 81 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 DEFB131BA0A096LNP1 70 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
CHD4-201ENST00000357008 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
CHD4-201ENST00000357008 Q6ZSV7 163 aa10.91□□□□□ -0.66
CHD4-201ENST00000357008 M0R378 163 aa10.9□□□□□ -0.66
CHD4-201ENST00000357008 BBC3Q96PG8 261 aaPredicted RBP10.9□□□□□ -0.66
CHD4-201ENST00000357008 PSMG3-AS1Q96PY0 264 aa10.9□□□□□ -0.66
CHD4-201ENST00000357008 HCFC1P51610 2035 aa10.9□□□□□ -0.66
CHD4-201ENST00000357008 A0A087WZ39 114 aa10.9□□□□□ -0.66
CHD4-201ENST00000357008 PTPN13Q12923 2485 aa10.9□□□□□ -0.66
CHD4-201ENST00000357008 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.67
CHD4-201ENST00000357008 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.67
CHD4-201ENST00000357008 TANC2Q9HCD6 1990 aa10.89□□□□□ -0.67
CHD4-201ENST00000357008 COX17Q14061 63 aa10.89□□□□□ -0.67
CHD4-201ENST00000357008 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
CHD4-201ENST00000357008 CUL9Q8IWT3 2517 aa10.88□□□□□ -0.67
CHD4-201ENST00000357008 MUC7Q8TAX7 377 aa10.88□□□□□ -0.67
CHD4-201ENST00000357008 MRGPRG-AS1Q2M3A8 158 aa10.88□□□□□ -0.67
CHD4-201ENST00000357008 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
CHD4-201ENST00000357008 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
CHD4-201ENST00000357008 IGLV1-40P01703 118 aa10.87□□□□□ -0.67
CHD4-201ENST00000357008 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
CHD4-201ENST00000357008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
CHD4-201ENST00000357008 LINC00482Q8N8I6 264 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 ZNF702PQ9H963 129 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 HILS1P60008 231 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 Q8IZM0 81 aa10.86□□□□□ -0.67
CHD4-201ENST00000357008 LOC100131303A0A0U1RQF7 123 aa10.85□□□□□ -0.67
CHD4-201ENST00000357008 UBE2D3P61077 147 aa10.85□□□□□ -0.67
CHD4-201ENST00000357008 UBE2D2P62837 147 aa10.85□□□□□ -0.67
CHD4-201ENST00000357008 PRR15LQ9BU68 103 aa10.85□□□□□ -0.67
CHD4-201ENST00000357008 ZNF73O43830 326 aaPredicted RBP10.85□□□□□ -0.67
CHD4-201ENST00000357008 LELP1Q5T871 98 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms