RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TMEM243Q9BU79 118 aa12.57□□□□□ -0.4
SMARCD3-202ENST00000356800 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-202ENST00000356800 CSDC2Q9Y534 153 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-202ENST00000356800 FBN3Q75N90 2809 aa12.56□□□□□ -0.4
SMARCD3-202ENST00000356800 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
SMARCD3-202ENST00000356800 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
SMARCD3-202ENST00000356800 OPRPNQ99935 248 aaPredicted RBP12.55□□□□□ -0.4
SMARCD3-202ENST00000356800 VCX2Q9H322 139 aa12.55□□□□□ -0.4
SMARCD3-202ENST00000356800 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
SMARCD3-202ENST00000356800 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 MRPS36P82909 103 aaKnown RBP12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 CEMP1Q6PRD7 247 aaPredicted RBP12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 AMELXQ99217 191 aa12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 FGF6P10767 208 aa12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 SH2D6Q7Z4S9 175 aa12.54□□□□□ -0.4
SMARCD3-202ENST00000356800 ZC2HC1BQ5TFG8 222 aa12.53□□□□□ -0.4
SMARCD3-202ENST00000356800 IGLV4-69A0A075B6H9 119 aa12.51□□□□□ -0.41
SMARCD3-202ENST00000356800 UBE2L6O14933 153 aa12.51□□□□□ -0.41
SMARCD3-202ENST00000356800 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
SMARCD3-202ENST00000356800 Q6ZUT4 128 aa12.51□□□□□ -0.41
SMARCD3-202ENST00000356800 STPG4Q8N801 248 aa12.51□□□□□ -0.41
SMARCD3-202ENST00000356800 IGLC3P0DOY3 106 aa12.5□□□□□ -0.41
SMARCD3-202ENST00000356800 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
SMARCD3-202ENST00000356800 GAGE6Q13070 117 aa12.5□□□□□ -0.41
SMARCD3-202ENST00000356800 LYPD5Q6UWN5 251 aa12.5□□□□□ -0.41
SMARCD3-202ENST00000356800 CHCHD5Q9BSY4 110 aa12.5□□□□□ -0.41
SMARCD3-202ENST00000356800 DNAH7Q8WXX0 4024 aa12.49□□□□□ -0.41
SMARCD3-202ENST00000356800 DYNC2H1Q8NCM8 4307 aaKnown RBP12.49□□□□□ -0.41
SMARCD3-202ENST00000356800 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 AMMECR1LQ6DCA0 310 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 OR5A1Q8NGJ0 315 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 CDC42SE2Q9NRR3 84 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 DDTP30046 118 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 TIRAPP58753 221 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 RNASE13Q5GAN3 156 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 TMEM101Q96IK0 257 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 MIEN1Q9BRT3 115 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 C2orf88Q9BSF0 95 aa12.48□□□□□ -0.41
SMARCD3-202ENST00000356800 C11orf86A6NJI1 115 aa12.47□□□□□ -0.41
SMARCD3-202ENST00000356800 LELP1Q5T871 98 aa12.47□□□□□ -0.41
SMARCD3-202ENST00000356800 IGLL5B9A064 214 aa12.46□□□□□ -0.41
SMARCD3-202ENST00000356800 ESRGQ1W209 222 aa12.46□□□□□ -0.41
SMARCD3-202ENST00000356800 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
SMARCD3-202ENST00000356800 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.41
SMARCD3-202ENST00000356800 C14orf144Q96I85 54 aa12.45□□□□□ -0.42
SMARCD3-202ENST00000356800 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
SMARCD3-202ENST00000356800 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
SMARCD3-202ENST00000356800 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
SMARCD3-202ENST00000356800 COX8AP10176 69 aa12.44□□□□□ -0.42
SMARCD3-202ENST00000356800 UBE2D1P51668 147 aa12.44□□□□□ -0.42
SMARCD3-202ENST00000356800 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
SMARCD3-202ENST00000356800 A0A0J9YXV3 536 aa12.43□□□□□ -0.42
SMARCD3-202ENST00000356800 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
SMARCD3-202ENST00000356800 MPV17L2Q567V2 206 aa12.43□□□□□ -0.42
SMARCD3-202ENST00000356800 Q8N3U1 123 aa12.43□□□□□ -0.42
SMARCD3-202ENST00000356800 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
SMARCD3-202ENST00000356800 FAM19A3Q7Z5A8 133 aa12.42□□□□□ -0.42
SMARCD3-202ENST00000356800 RBX1P62877 108 aa12.42□□□□□ -0.42
SMARCD3-202ENST00000356800 SLC25A34Q6PIV7 304 aa12.42□□□□□ -0.42
SMARCD3-202ENST00000356800 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
SMARCD3-202ENST00000356800 LINC00587B1AMM8 73 aa12.41□□□□□ -0.42
SMARCD3-202ENST00000356800 E9PLD3 99 aa12.4□□□□□ -0.42
SMARCD3-202ENST00000356800 ZNF22P17026 224 aaPredicted RBP12.4□□□□□ -0.42
SMARCD3-202ENST00000356800 NMUP48645 174 aa12.4□□□□□ -0.42
SMARCD3-202ENST00000356800 TCTAP57738 103 aa12.4□□□□□ -0.42
SMARCD3-202ENST00000356800 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
SMARCD3-202ENST00000356800 DLEU1O43261 78 aa12.39□□□□□ -0.43
SMARCD3-202ENST00000356800 SEC11AP67812 179 aa12.39□□□□□ -0.43
SMARCD3-202ENST00000356800 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
SMARCD3-202ENST00000356800 BOD1L2Q8IYS8 172 aa12.39□□□□□ -0.43
SMARCD3-202ENST00000356800 TGP01266 2768 aa12.39□□□□□ -0.43
SMARCD3-202ENST00000356800 TRAV8-6A0A0B4J262 113 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 HERVK_113P61574 105 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 LINC00242Q5T6M2 205 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
SMARCD3-202ENST00000356800 TRAV13-1A0A0B4J241 112 aa12.37□□□□□ -0.43
SMARCD3-202ENST00000356800 HERVK_113P63121 156 aa12.37□□□□□ -0.43
SMARCD3-202ENST00000356800 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
SMARCD3-202ENST00000356800 GEMIN7Q9H840 131 aaKnown RBP12.37□□□□□ -0.43
SMARCD3-202ENST00000356800 LINC00588Q9Y4M8 146 aa12.37□□□□□ -0.43
SMARCD3-202ENST00000356800 NUPR2A6NF83 97 aa12.36□□□□□ -0.43
SMARCD3-202ENST00000356800 STARD9Q9P2P6 4700 aa12.36□□□□□ -0.43
SMARCD3-202ENST00000356800 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
SMARCD3-202ENST00000356800 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
SMARCD3-202ENST00000356800 LINC00469Q8N7U9 141 aa12.35□□□□□ -0.43
SMARCD3-202ENST00000356800 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
SMARCD3-202ENST00000356800 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
SMARCD3-202ENST00000356800 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
SMARCD3-202ENST00000356800 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
SMARCD3-202ENST00000356800 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
SMARCD3-202ENST00000356800 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
SMARCD3-202ENST00000356800 COX6A2Q02221 97 aa12.33□□□□□ -0.44
SMARCD3-202ENST00000356800 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 H3BRM9 83 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 SIVA1O15304 175 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 CCL18P55774 89 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms