RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
TRIO-202ENST00000344204 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
TRIO-202ENST00000344204 IGHV7-81A0A0B4J1V7 117 aa10.29□□□□□ -0.76
TRIO-202ENST00000344204 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
TRIO-202ENST00000344204 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 CEMP1Q6PRD7 247 aaPredicted RBP10.28□□□□□ -0.76
TRIO-202ENST00000344204 TMEM105Q8N8V8 129 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 PRO0461Q9UI25 63 aa10.28□□□□□ -0.76
TRIO-202ENST00000344204 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.77
TRIO-202ENST00000344204 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
TRIO-202ENST00000344204 CCKP06307 115 aa10.27□□□□□ -0.77
TRIO-202ENST00000344204 SPRNQ5BIV9 151 aa10.26□□□□□ -0.77
TRIO-202ENST00000344204 CRYGAP11844 174 aa10.26□□□□□ -0.77
TRIO-202ENST00000344204 LINC00574Q9H8X3 128 aa10.26□□□□□ -0.77
TRIO-202ENST00000344204 FASNP49327 2511 aaKnown RBP10.25□□□□□ -0.77
TRIO-202ENST00000344204 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
TRIO-202ENST00000344204 B4DSR2 109 aa10.25□□□□□ -0.77
TRIO-202ENST00000344204 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 GYPEP15421 78 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 DSCR9P59020 149 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 A8MZ25 164 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 C16orf74Q96GX8 76 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 EPG5Q9HCE0 2579 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 M0QY20 66 aa10.24□□□□□ -0.77
TRIO-202ENST00000344204 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
TRIO-202ENST00000344204 TRBV7-6A0A0J9YX20 115 aa10.23□□□□□ -0.77
TRIO-202ENST00000344204 Q8N7P7 452 aa10.23□□□□□ -0.77
TRIO-202ENST00000344204 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
TRIO-202ENST00000344204 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
TRIO-202ENST00000344204 VPREB1P12018 145 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 A0A087WVE0 104 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 IGHV4OR15-8A0A075B7B6 117 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 A0A087WW49 117 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 PSPHP1O15172 72 aa10.22□□□□□ -0.77
TRIO-202ENST00000344204 DEFB1P60022 68 aa10.21□□□□□ -0.77
TRIO-202ENST00000344204 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.77
TRIO-202ENST00000344204 TSHBP01222 138 aa10.21□□□□□ -0.78
TRIO-202ENST00000344204 PRYO14603 147 aa10.21□□□□□ -0.78
TRIO-202ENST00000344204 BPESC1Q9GZL8 116 aa10.2□□□□□ -0.78
TRIO-202ENST00000344204 SEM1Q6ZVN7 128 aa10.2□□□□□ -0.78
TRIO-202ENST00000344204 PSCAO43653 123 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 PRR4Q16378 134 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 A0A096LNJ9 63 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
TRIO-202ENST00000344204 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 ZFAND2AQ8N6M9 145 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 A0A096LPF7 62 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 SMIM11BQ8TCY0 68 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 LY6G6EA0A0G2JKS1 128 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 U3KQA8 63 aa10.18□□□□□ -0.78
TRIO-202ENST00000344204 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 RMI2Q96E14 147 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 F8WDY8 70 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 C22orf34Q6ZV56 151 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 CENPFP49454 3210 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 LRCOL1A6NCL2 159 aa10.17□□□□□ -0.78
TRIO-202ENST00000344204 ESRGQ1W209 222 aa10.16□□□□□ -0.78
TRIO-202ENST00000344204 IGIPA6NJ69 53 aa10.16□□□□□ -0.78
TRIO-202ENST00000344204 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
TRIO-202ENST00000344204 K7EMT4 169 aa10.16□□□□□ -0.78
TRIO-202ENST00000344204 H0Y9J4 135 aa10.16□□□□□ -0.78
TRIO-202ENST00000344204 LINC01356Q8N9X3 169 aa10.15□□□□□ -0.78
TRIO-202ENST00000344204 EBI3Q14213 229 aa10.15□□□□□ -0.78
TRIO-202ENST00000344204 C5orf56Q8N8D9 126 aa10.15□□□□□ -0.78
TRIO-202ENST00000344204 CENPEQ02224 2701 aa10.15□□□□□ -0.78
TRIO-202ENST00000344204 UBE2DNLQ8IWF7 75 aa10.14□□□□□ -0.79
TRIO-202ENST00000344204 C3orf84H3BNL1 204 aa10.14□□□□□ -0.79
TRIO-202ENST00000344204 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
TRIO-202ENST00000344204 IGF1P05019 195 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 CGB3P0DN86 165 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 CGB7P0DN87 165 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 C1orf229Q6ZS94 237 aaPredicted RBP10.13□□□□□ -0.79
TRIO-202ENST00000344204 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 LINC01546A6NGU7 62 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 MSMBP08118 114 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 Q8N9W7 124 aa10.13□□□□□ -0.79
TRIO-202ENST00000344204 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
TRIO-202ENST00000344204 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
TRIO-202ENST00000344204 APOC4P55056 127 aa10.12□□□□□ -0.79
TRIO-202ENST00000344204 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
TRIO-202ENST00000344204 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
TRIO-202ENST00000344204 FAM215AQ9Y5M1 114 aa10.11□□□□□ -0.79
TRIO-202ENST00000344204 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
TRIO-202ENST00000344204 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
TRIO-202ENST00000344204 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
TRIO-202ENST00000344204 ADAMTSL4-AS1Q5T5F5 129 aa10.1□□□□□ -0.79
TRIO-202ENST00000344204 SMAD5-AS1Q9Y6J3 95 aa10.1□□□□□ -0.79
TRIO-202ENST00000344204 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
TRIO-202ENST00000344204 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms