RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HPGDSO60760 199 aa5.58□□□□□ -1.52
ATXN3-201ENST00000340660 CST7O76096 145 aa5.58□□□□□ -1.52
ATXN3-201ENST00000340660 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
ATXN3-201ENST00000340660 H3BMQ9 156 aa5.57□□□□□ -1.52
ATXN3-201ENST00000340660 NDUFA1O15239 70 aa5.57□□□□□ -1.52
ATXN3-201ENST00000340660 TCRAP04437 139 aa5.57□□□□□ -1.52
ATXN3-201ENST00000340660 DEFA3P59666 94 aa5.57□□□□□ -1.52
ATXN3-201ENST00000340660 SCGB3A2Q96PL1 93 aa5.57□□□□□ -1.52
ATXN3-201ENST00000340660 SERTM2A0A1B0GWG4 89 aa5.56□□□□□ -1.52
ATXN3-201ENST00000340660 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
ATXN3-201ENST00000340660 AKAIN1P0CW23 69 aa5.56□□□□□ -1.52
ATXN3-201ENST00000340660 RPL37P61927 97 aaKnown RBP5.56□□□□□ -1.52
ATXN3-201ENST00000340660 TMEM128Q5BJH2 165 aa5.56□□□□□ -1.52
ATXN3-201ENST00000340660 MRPL55Q7Z7F7 128 aaKnown RBP5.56□□□□□ -1.52
ATXN3-201ENST00000340660 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
ATXN3-201ENST00000340660 MUC21A0A140T8X8 626 aa5.55□□□□□ -1.52
ATXN3-201ENST00000340660 TMEM241Q24JQ0 296 aa5.55□□□□□ -1.52
ATXN3-201ENST00000340660 SAPCD1Q5SSQ6 148 aa5.55□□□□□ -1.52
ATXN3-201ENST00000340660 C5orf38Q86SI9 138 aa5.55□□□□□ -1.52
ATXN3-201ENST00000340660 SLC25A21Q9BQT8 299 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-201ENST00000340660 SH2D1AO60880 128 aa5.54□□□□□ -1.52
ATXN3-201ENST00000340660 PRLHP81277 87 aa5.54□□□□□ -1.52
ATXN3-201ENST00000340660 PACRGQ96M98 296 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-201ENST00000340660 GSKIPQ9P0R6 139 aa5.54□□□□□ -1.52
ATXN3-201ENST00000340660 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 K7EQM0 130 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 SFT2D2O95562 160 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 ZNF25P17030 456 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-201ENST00000340660 PPP1R1AQ13522 171 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 KHDC3LQ587J8 217 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 OR10D4PQ8NGN7 298 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 MARVELD1Q9BSK0 173 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
ATXN3-201ENST00000340660 NDUFC2-KCTD14E9PQ53 114 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 F8WDY8 70 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 H7C423 109 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 RPS20P60866 119 aaKnown RBP5.52□□□□□ -1.53
ATXN3-201ENST00000340660 Q86TA4 180 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 AP3S1Q92572 193 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 SCP2D1Q9UJQ7 156 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 ARL2-SNX15V9GYD0 113 aa5.52□□□□□ -1.53
ATXN3-201ENST00000340660 A6NN06 94 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 MGPP08493 103 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 UBE2G2P60604 165 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 SSTP61278 116 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 SSBP1Q04837 148 aaKnown RBP5.51□□□□□ -1.53
ATXN3-201ENST00000340660 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 C5orf17Q8NAS9 161 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 LINC00167Q96N53 147 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 ALG5Q9Y673 324 aa5.51□□□□□ -1.53
ATXN3-201ENST00000340660 C20orf202A1L168 122 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 FAM25AB3EWG3 89 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 FAM25CB3EWG5 89 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 FAM25GB3EWG6 89 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 ATP5HO75947 161 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 OR5AL1P0C617 328 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 SMIM17P0DL12 118 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 SPRR2DP22532 72 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 BCAP31P51572 246 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 RASL11AQ6T310 242 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 THAP6Q8TBB0 222 aa5.5□□□□□ -1.53
ATXN3-201ENST00000340660 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 LRRC37A5PQ49AS3 106 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 LINC00469Q8N7U9 141 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 TMEM101Q96IK0 257 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 BTF3L4Q96K17 158 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 CDC42SE2Q9NRR3 84 aa5.49□□□□□ -1.53
ATXN3-201ENST00000340660 S100A11P31949 105 aa5.48□□□□□ -1.53
ATXN3-201ENST00000340660 PNRC1Q12796 327 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-201ENST00000340660 AP1S3Q96PC3 154 aa5.48□□□□□ -1.53
ATXN3-201ENST00000340660 SPRR4Q96PI1 79 aa5.48□□□□□ -1.53
ATXN3-201ENST00000340660 NIT2Q9NQR4 276 aa5.48□□□□□ -1.53
ATXN3-201ENST00000340660 MCUBQ9NWR8 336 aa5.48□□□□□ -1.53
ATXN3-201ENST00000340660 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
ATXN3-201ENST00000340660 GAGE10A6NGK3 116 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 C1orf196B1AJZ1 125 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 L7N2F9 121 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 SNAI2O43623 268 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 TAS2R45P59539 299 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 VAMP2P63027 116 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 XAGE1AQ9HD64 81 aa5.47□□□□□ -1.53
ATXN3-201ENST00000340660 IGSF23A1L1A6 192 aa5.46□□□□□ -1.54
ATXN3-201ENST00000340660 SULT1A1P50225 295 aa5.46□□□□□ -1.54
ATXN3-201ENST00000340660 IL18Q14116 193 aa5.46□□□□□ -1.54
ATXN3-201ENST00000340660 CYTL1Q9NRR1 136 aa5.46□□□□□ -1.54
ATXN3-201ENST00000340660 EPDR1Q9UM22 224 aa5.46□□□□□ -1.54
ATXN3-201ENST00000340660 ANKRD20A5PA0PJZ0 165 aa5.45□□□□□ -1.54
ATXN3-201ENST00000340660 APCSP02743 223 aa5.45□□□□□ -1.54
ATXN3-201ENST00000340660 SMIM4Q8WVI0 70 aa5.45□□□□□ -1.54
ATXN3-201ENST00000340660 BLOC1S6Q9UL45 172 aa5.45□□□□□ -1.54
ATXN3-201ENST00000340660 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
ATXN3-201ENST00000340660 NCR2O95944 276 aa5.44□□□□□ -1.54
ATXN3-201ENST00000340660 LSM3P62310 102 aaKnown RBP5.43□□□□□ -1.54
ATXN3-201ENST00000340660 C2orf82Q6UX34 121 aa5.43□□□□□ -1.54
ATXN3-201ENST00000340660 COX8CQ7Z4L0 72 aa5.43□□□□□ -1.54
ATXN3-201ENST00000340660 C15orf40Q8WUR7 153 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms