RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 A0A096LPF7 62 aa13□□□□□ -0.33
LYSMD4-201ENST00000332728 IGHV3-30-3P0DP02 117 aa13□□□□□ -0.33
LYSMD4-201ENST00000332728 SH2D6Q7Z4S9 175 aa13□□□□□ -0.33
LYSMD4-201ENST00000332728 C10orf126Q8N4M7 172 aa13□□□□□ -0.33
LYSMD4-201ENST00000332728 COX6A2Q02221 97 aa12.99□□□□□ -0.33
LYSMD4-201ENST00000332728 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
LYSMD4-201ENST00000332728 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
LYSMD4-201ENST00000332728 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
LYSMD4-201ENST00000332728 MAST4O15021 2626 aa12.99□□□□□ -0.33
LYSMD4-201ENST00000332728 TRAV25A0A0B4J276 109 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 FBN1P35555 2871 aaKnown RBP12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 RRN3P1Q2M238 152 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
LYSMD4-201ENST00000332728 TMEM263Q8WUH6 116 aaKnown RBP12.97□□□□□ -0.33
LYSMD4-201ENST00000332728 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
LYSMD4-201ENST00000332728 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
LYSMD4-201ENST00000332728 PSMB2P49721 201 aa12.97□□□□□ -0.33
LYSMD4-201ENST00000332728 IGHV3-30P01768 117 aa12.96□□□□□ -0.33
LYSMD4-201ENST00000332728 IGHV3-30-5P0DP03 117 aa12.96□□□□□ -0.33
LYSMD4-201ENST00000332728 MUSTN1Q8IVN3 82 aa12.96□□□□□ -0.33
LYSMD4-201ENST00000332728 A4D1N5 150 aa12.96□□□□□ -0.34
LYSMD4-201ENST00000332728 K7EQD1 137 aa12.96□□□□□ -0.34
LYSMD4-201ENST00000332728 LEPROTO15243 131 aa12.96□□□□□ -0.34
LYSMD4-201ENST00000332728 TAL2Q16559 108 aa12.96□□□□□ -0.34
LYSMD4-201ENST00000332728 TSPAN13O95857 204 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 TRGV4A0A0C4DH28 118 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 PLAC8L1A1L4L8 177 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 CRLF1O75462 422 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 CFC1BP0CG36 223 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 CFC1P0CG37 223 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
LYSMD4-201ENST00000332728 FOSL1P15407 271 aa12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 RPL36AP83881 106 aaKnown RBP12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 ADAMTSL4-AS1Q5T5F5 129 aa12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 RPL36ALQ969Q0 106 aaKnown RBP12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 TEX48A0A1B0GUV7 120 aa12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 ETDBQ3ZM63 59 aa12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
LYSMD4-201ENST00000332728 GAGE6Q13070 117 aa12.93□□□□□ -0.34
LYSMD4-201ENST00000332728 A0A0J9YXY3 114 aa12.93□□□□□ -0.34
LYSMD4-201ENST00000332728 NDUFA12Q9UI09 145 aa12.93□□□□□ -0.34
LYSMD4-201ENST00000332728 NDUFA11Q86Y39 141 aa12.92□□□□□ -0.34
LYSMD4-201ENST00000332728 PTH2Q96A98 100 aa12.92□□□□□ -0.34
LYSMD4-201ENST00000332728 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
LYSMD4-201ENST00000332728 SCGB1C2P0DMR2 95 aa12.91□□□□□ -0.34
LYSMD4-201ENST00000332728 OR5A1Q8NGJ0 315 aa12.91□□□□□ -0.34
LYSMD4-201ENST00000332728 INSL3P51460 131 aa12.9□□□□□ -0.34
LYSMD4-201ENST00000332728 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
LYSMD4-201ENST00000332728 PYGO1Q9Y3Y4 419 aa12.9□□□□□ -0.34
LYSMD4-201ENST00000332728 Q1RN00 199 aa12.9□□□□□ -0.34
LYSMD4-201ENST00000332728 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
LYSMD4-201ENST00000332728 TMEM238LA0A1B0GVL6 79 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 A6NJY4 79 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 PCP4P48539 62 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 UBE2D1P51668 147 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 TRAV4A0A0B4J268 109 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 CLPSL2Q6UWE3 100 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 SPANXA1Q9NS26 97 aa12.89□□□□□ -0.35
LYSMD4-201ENST00000332728 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
LYSMD4-201ENST00000332728 UBE2L6O14933 153 aa12.88□□□□□ -0.35
LYSMD4-201ENST00000332728 CBY1Q9Y3M2 126 aa12.88□□□□□ -0.35
LYSMD4-201ENST00000332728 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 K7ERU9 68 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 VSIG2Q96IQ7 327 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 UBE2D3P61077 147 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 UBE2D2P62837 147 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 TMEM101Q96IK0 257 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
LYSMD4-201ENST00000332728 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
LYSMD4-201ENST00000332728 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
LYSMD4-201ENST00000332728 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
LYSMD4-201ENST00000332728 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
LYSMD4-201ENST00000332728 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
LYSMD4-201ENST00000332728 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
LYSMD4-201ENST00000332728 TCL1BO95988 128 aa12.84□□□□□ -0.35
LYSMD4-201ENST00000332728 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
LYSMD4-201ENST00000332728 Q9H8V8 135 aa12.84□□□□□ -0.35
LYSMD4-201ENST00000332728 PRO1854Q9UHT4 67 aa12.84□□□□□ -0.35
LYSMD4-201ENST00000332728 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
LYSMD4-201ENST00000332728 PIK3CD-AS1Q5SR53 167 aa12.83□□□□□ -0.36
LYSMD4-201ENST00000332728 COL6A5A8TX70 2615 aa12.83□□□□□ -0.36
LYSMD4-201ENST00000332728 CLUHP3Q96NS8 147 aa12.83□□□□□ -0.36
LYSMD4-201ENST00000332728 HTN3P15516 51 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 FHL2Q14192 279 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 LITAFQ99732 161 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 TMEM238C9JI98 176 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 ANK2Q01484 3957 aa12.82□□□□□ -0.36
LYSMD4-201ENST00000332728 TMEM262E9PQX1 116 aa12.81□□□□□ -0.36
LYSMD4-201ENST00000332728 Q8N3U1 123 aa12.81□□□□□ -0.36
LYSMD4-201ENST00000332728 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
LYSMD4-201ENST00000332728 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
LYSMD4-201ENST00000332728 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms