RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 A0A1B0GV72 72 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 SLC25A20O43772 301 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 SPANXA1Q9NS26 97 aa10.16□□□□□ -0.78
ATP2C1-201ENST00000328560 PPDPFLQ8WWR9 84 aa10.15□□□□□ -0.78
ATP2C1-201ENST00000328560 VSIG2Q96IQ7 327 aa10.15□□□□□ -0.78
ATP2C1-201ENST00000328560 NOTCH2Q04721 2471 aa10.15□□□□□ -0.78
ATP2C1-201ENST00000328560 NDUFA7O95182 113 aa10.15□□□□□ -0.78
ATP2C1-201ENST00000328560 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.79
ATP2C1-201ENST00000328560 APCP25054 2843 aa10.14□□□□□ -0.79
ATP2C1-201ENST00000328560 A0A0B4J2C4 111 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 TINCRA0A1B0GVN0 87 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 Q6ZTI0 123 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 NIPBLQ6KC79 2804 aaeCLIP10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 A8MTW9 85 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 GAGE4Q13068 117 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 GAGE5Q13069 117 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 C1orf158Q8N1D5 194 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 ATP6V0E2Q8NHE4 81 aa10.13□□□□□ -0.79
ATP2C1-201ENST00000328560 FHL3Q13643 280 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 RS1O15537 224 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 TRIAP1O43715 76 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 COX6A2Q02221 97 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 LITAFQ99732 161 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 EDA2RQ9HAV5 297 aa10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.12□□□□□ -0.79
ATP2C1-201ENST00000328560 MT-ATP8P03928 68 aa10.11□□□□□ -0.79
ATP2C1-201ENST00000328560 CITED1Q99966 193 aa10.11□□□□□ -0.79
ATP2C1-201ENST00000328560 CDIP1Q9H305 208 aa10.11□□□□□ -0.79
ATP2C1-201ENST00000328560 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
ATP2C1-201ENST00000328560 DNAJC30Q96LL9 226 aa10.11□□□□□ -0.79
ATP2C1-201ENST00000328560 TRAV25A0A0B4J276 109 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 NTN5Q8WTR8 489 aaPredicted RBP10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 UBR5O95071 2799 aaPredicted RBP10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 TMEM101Q96IK0 257 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 HIVEP2P31629 2446 aa10.1□□□□□ -0.79
ATP2C1-201ENST00000328560 J3QKU1 62 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 HERV-K104P63124 156 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 MIAQ16674 131 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 KRTAP1-3Q8IUG1 177 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 Q9H8V8 135 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 ESM1Q9NQ30 184 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 XGP55808 180 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 CLEC2BQ92478 149 aa10.09□□□□□ -0.79
ATP2C1-201ENST00000328560 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 TRGV2A0A075B6R0 118 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 GAGE7O76087 117 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 ICOSQ9Y6W8 199 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 PLA2G2AP14555 144 aa10.08□□□□□ -0.8
ATP2C1-201ENST00000328560 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
ATP2C1-201ENST00000328560 COX6CP09669 75 aa10.07□□□□□ -0.8
ATP2C1-201ENST00000328560 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
ATP2C1-201ENST00000328560 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
ATP2C1-201ENST00000328560 K7EQD1 137 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 CIRBPQ14011 172 aaKnown RBP10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 SCGB1A1P11684 91 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 LOC100131303A0A0U1RQF7 123 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
ATP2C1-201ENST00000328560 CKS1BP61024 79 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 C2orf82Q6UX34 121 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 UBE2L6O14933 153 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 PRIMA1Q86XR5 153 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
ATP2C1-201ENST00000328560 SETXQ7Z333 2677 aaKnown RBP10.04□□□□□ -0.8
ATP2C1-201ENST00000328560 HERVK_113P63121 156 aa10.04□□□□□ -0.8
ATP2C1-201ENST00000328560 TIRAPP58753 221 aa10.04□□□□□ -0.8
ATP2C1-201ENST00000328560 PF4P02776 101 aa10.03□□□□□ -0.8
ATP2C1-201ENST00000328560 TOMM7Q9P0U1 55 aa10.03□□□□□ -0.8
ATP2C1-201ENST00000328560 NDUFA1O15239 70 aa10.02□□□□□ -0.8
ATP2C1-201ENST00000328560 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
ATP2C1-201ENST00000328560 TRBV10-2A0A0K0K1G8 114 aa10.02□□□□□ -0.81
ATP2C1-201ENST00000328560 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.81
ATP2C1-201ENST00000328560 GAGE6Q13070 117 aa10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 TRAV4A0A0B4J268 109 aa10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 DAZ2Q13117 558 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-201ENST00000328560 DAZ4Q86SG3 579 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms