RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 GAGE12JA6NER3 117 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 DPM2O94777 84 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 POLR2KP53803 58 aaKnown RBP6.55□□□□□ -1.36
CD46-202ENST00000322918 GAGE4Q13068 117 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
CD46-202ENST00000322918 TMEM263Q8WUH6 116 aaKnown RBP6.55□□□□□ -1.36
CD46-202ENST00000322918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.54□□□□□ -1.36
CD46-202ENST00000322918 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 IGKV2-29A2NJV5 120 aaPredicted RBP6.54□□□□□ -1.36
CD46-202ENST00000322918 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 A0A096LPF7 62 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 ATP5LO75964 103 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 ATP6V0E2Q8NHE4 81 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 TRBV20-1A0A075B6N2 111 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 PPP1R17O96001 155 aa6.54□□□□□ -1.36
CD46-202ENST00000322918 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
CD46-202ENST00000322918 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 CMC4P56277 68 aaPredicted RBP6.53□□□□□ -1.36
CD46-202ENST00000322918 RPL32P62910 135 aaKnown RBP6.53□□□□□ -1.36
CD46-202ENST00000322918 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 SPXQ9BT56 116 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 TRGV4A0A0C4DH28 118 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 H7C1H1 209 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 I3L3M4 83 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 HTN3P15516 51 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 TAL2Q16559 108 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 TOMM6Q96B49 74 aa6.53□□□□□ -1.36
CD46-202ENST00000322918 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 LINC01549A6NIU2 74 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 TSHBP01222 138 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 PPDPFLQ8WWR9 84 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 BAALCQ8WXS3 180 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 FAM110AQ9BQ89 295 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
CD46-202ENST00000322918 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
CD46-202ENST00000322918 IGHV4-30-4P0DP06 118 aa6.51□□□□□ -1.37
CD46-202ENST00000322918 TEN1Q86WV5 123 aa6.51□□□□□ -1.37
CD46-202ENST00000322918 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
CD46-202ENST00000322918 RETNQ9HD89 108 aa6.51□□□□□ -1.37
CD46-202ENST00000322918 IGKV3OR2-268A0A0C4DH90 116 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 TMEM170BQ5T4T1 132 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 A0A087WX48 190 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 A0A0J9YY99 117 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 RS1O15537 224 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 RHODO00212 210 aa6.5□□□□□ -1.37
CD46-202ENST00000322918 TRBV6-5A0A0K0K1A5 114 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 NDUFV3P56181 108 aaKnown RBP6.49□□□□□ -1.37
CD46-202ENST00000322918 KRTAP10-11P60412 298 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 GAGE2EQ4V326 116 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 C20orf203Q8NBC4 194 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 GAGE2DQ9UEU5 116 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 ANK2Q01484 3957 aa6.49□□□□□ -1.37
CD46-202ENST00000322918 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 IGIPA6NJ69 53 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 K7EQD1 137 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 TCL1BO95988 128 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 DGAT2L7PQ6IED9 249 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 X6R8D5 127 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 C11orf86A6NJI1 115 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 F8VRH5 84 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
CD46-202ENST00000322918 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
CD46-202ENST00000322918 VCX2Q9H322 139 aa6.48□□□□□ -1.37
CD46-202ENST00000322918 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
CD46-202ENST00000322918 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 A0A0J9YXV3 536 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 LINC00694P0DN24 101 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 DAZ2Q13117 558 aaKnown RBP6.47□□□□□ -1.37
CD46-202ENST00000322918 MRAPQ8TCY5 172 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 TMEM262E9PQX1 116 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 SNCGO76070 127 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 UBE2D3P61077 147 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 UBE2D2P62837 147 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 PMVKQ15126 192 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 WFDC9Q8NEX5 89 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 IL17DQ8TAD2 202 aa6.47□□□□□ -1.37
CD46-202ENST00000322918 PLNP26678 52 aa6.46□□□□□ -1.37
CD46-202ENST00000322918 CELA1Q9UNI1 258 aa6.46□□□□□ -1.37
CD46-202ENST00000322918 IFITM1P13164 125 aa6.46□□□□□ -1.38
CD46-202ENST00000322918 APOC4P55056 127 aa6.46□□□□□ -1.38
CD46-202ENST00000322918 PLEKHB2Q96CS7 222 aa6.46□□□□□ -1.38
CD46-202ENST00000322918 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
CD46-202ENST00000322918 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
CD46-202ENST00000322918 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
CD46-202ENST00000322918 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms