RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 WFDC11Q8NEX6 87 aa11.38□□□□□ -0.59
VARS2-201ENST00000321897 TIMM17AQ99595 171 aa11.38□□□□□ -0.59
VARS2-201ENST00000321897 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
VARS2-201ENST00000321897 C6orf226Q5I0X4 101 aa11.37□□□□□ -0.59
VARS2-201ENST00000321897 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
VARS2-201ENST00000321897 CCL24O00175 119 aa11.37□□□□□ -0.59
VARS2-201ENST00000321897 RHOHQ15669 191 aa11.37□□□□□ -0.59
VARS2-201ENST00000321897 MAST4O15021 2626 aa11.36□□□□□ -0.59
VARS2-201ENST00000321897 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
VARS2-201ENST00000321897 LAMTOR3Q9UHA4 124 aa11.36□□□□□ -0.59
VARS2-201ENST00000321897 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
VARS2-201ENST00000321897 ZMAT4Q9H898 229 aa11.36□□□□□ -0.59
VARS2-201ENST00000321897 DEFB113Q30KQ7 82 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 RNASE3P12724 160 aaKnown RBP11.35□□□□□ -0.59
VARS2-201ENST00000321897 C20orf203Q8NBC4 194 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 HELZ2Q9BYK8 2649 aaKnown RBP11.35□□□□□ -0.59
VARS2-201ENST00000321897 SOCS3O14543 225 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 UBE2D1P51668 147 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 HAMPP81172 84 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 PRORYQ9H606 182 aa11.35□□□□□ -0.59
VARS2-201ENST00000321897 F8P00451 2351 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 H3BT86 120 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 H3BUA1 57 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 C5orf38Q86SI9 138 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
VARS2-201ENST00000321897 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
VARS2-201ENST00000321897 SPANXA1Q9NS26 97 aa11.33□□□□□ -0.6
VARS2-201ENST00000321897 MALP21145 153 aa11.33□□□□□ -0.6
VARS2-201ENST00000321897 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
VARS2-201ENST00000321897 TMEM86BQ8N661 226 aa11.33□□□□□ -0.6
VARS2-201ENST00000321897 ATP5G1P05496 136 aa11.32□□□□□ -0.6
VARS2-201ENST00000321897 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 hADV29S1A0JD25 119 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
VARS2-201ENST00000321897 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
VARS2-201ENST00000321897 C14orf132Q9NPU4 83 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
VARS2-201ENST00000321897 ZANQ9Y493 2812 aa11.31□□□□□ -0.6
VARS2-201ENST00000321897 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
VARS2-201ENST00000321897 UBE2D3P61077 147 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 UBE2D2P62837 147 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 XCL1P47992 114 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 HERVK_113P63121 156 aa11.3□□□□□ -0.6
VARS2-201ENST00000321897 SVIPQ8NHG7 77 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 IGLV2-18A0A075B6J9 118 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 J3KT08 172 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 K7EQG2 157 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 M0QXV9 152 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 J3QLI3 93 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 Q6ZTI0 123 aa11.29□□□□□ -0.6
VARS2-201ENST00000321897 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
VARS2-201ENST00000321897 TMEM223A0PJW6 202 aa11.28□□□□□ -0.6
VARS2-201ENST00000321897 IGSF10Q6WRI0 2623 aa11.28□□□□□ -0.6
VARS2-201ENST00000321897 K7EMT4 169 aa11.28□□□□□ -0.6
VARS2-201ENST00000321897 LECT2O14960 151 aa11.28□□□□□ -0.6
VARS2-201ENST00000321897 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.6
VARS2-201ENST00000321897 F5H768 121 aa11.27□□□□□ -0.6
VARS2-201ENST00000321897 MIAQ16674 131 aa11.27□□□□□ -0.61
VARS2-201ENST00000321897 PIK3CD-AS1Q5SR53 167 aa11.27□□□□□ -0.61
VARS2-201ENST00000321897 H7C423 109 aa11.27□□□□□ -0.61
VARS2-201ENST00000321897 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
VARS2-201ENST00000321897 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
VARS2-201ENST00000321897 TMEM243Q9BU79 118 aa11.26□□□□□ -0.61
VARS2-201ENST00000321897 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
VARS2-201ENST00000321897 TMEM263Q8WUH6 116 aaKnown RBP11.26□□□□□ -0.61
VARS2-201ENST00000321897 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
VARS2-201ENST00000321897 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 PSMB8P28062 276 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 ACYP1P07311 99 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
VARS2-201ENST00000321897 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
VARS2-201ENST00000321897 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
VARS2-201ENST00000321897 SMG1Q96Q15 3661 aaKnown RBP11.24□□□□□ -0.61
VARS2-201ENST00000321897 SLPIP03973 132 aa11.24□□□□□ -0.61
VARS2-201ENST00000321897 FHL3Q13643 280 aa11.24□□□□□ -0.61
VARS2-201ENST00000321897 ATOX1O00244 68 aa11.24□□□□□ -0.61
VARS2-201ENST00000321897 M0QY20 66 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
VARS2-201ENST00000321897 TRAV23DV6A0A075B6W5 121 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 MIR7-3HGQ8N6C7 128 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
VARS2-201ENST00000321897 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
VARS2-201ENST00000321897 NDUFA7O95182 113 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms