RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SOCS3O14543 225 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 FSTL3O95633 263 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 Q6ZSV7 163 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 DEFB114Q30KQ6 69 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 FOXI1Q12951 378 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 NFE4Q86UQ8 179 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 IGKV3D-7A0A0C4DH55 119 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 ZNF22P17026 224 aaPredicted RBP12.23□□□□□ -0.45
CLIP4-201ENST00000320081 SS18L2Q9UHA2 77 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 INSL3P51460 131 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 NDUFA7O95182 113 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 PSMB8P28062 276 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 COL5A1P20908 1838 aaPredicted RBP12.22□□□□□ -0.45
CLIP4-201ENST00000320081 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
CLIP4-201ENST00000320081 APOC4P55056 127 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 SMR3AQ99954 134 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 A0A096LNJ9 63 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 LECT2O14960 151 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 Q6YL49 198 aa12.21□□□□□ -0.46
CLIP4-201ENST00000320081 TEX49A0A1B0GTD5 131 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
CLIP4-201ENST00000320081 INAFM2P0DMQ5 153 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 COL12A1Q99715 3063 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 U3KQK5 164 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 MED14OSP0DP75 135 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 IFITM1P13164 125 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 LGALS9O00182 355 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 NCR3O14931 201 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 CRYGDP07320 174 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
CLIP4-201ENST00000320081 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 PCSK5Q92824 1860 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 COX7A2LO14548 114 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 LINC00269Q8N2A0 174 aa12.15□□□□□ -0.46
CLIP4-201ENST00000320081 SLPIP03973 132 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 CRIP2P52943 208 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-201ENST00000320081 DMDP11532 3685 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 SETXQ7Z333 2677 aaKnown RBP12.14□□□□□ -0.47
CLIP4-201ENST00000320081 KLLNB2CW77 178 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
CLIP4-201ENST00000320081 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TSHBP01222 138 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 UBL5Q9BZL1 73 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TEX15Q9BXT5 2789 aa12.12□□□□□ -0.47
CLIP4-201ENST00000320081 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 TRIAP1O43715 76 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 PRB2P02812 416 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-201ENST00000320081 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
CLIP4-201ENST00000320081 LINC01006Q8NI28 216 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 WDFY3Q8IZQ1 3526 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 NBEAL1Q6ZS30 2694 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 HERV-K104P63124 156 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
CLIP4-201ENST00000320081 MIAQ16674 131 aa12.09□□□□□ -0.47
CLIP4-201ENST00000320081 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms