RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 WFDC11Q8NEX6 87 aa7.93□□□□□ -1.14
MUC4-201ENST00000308466 CHD6Q8TD26 2715 aa7.93□□□□□ -1.14
MUC4-201ENST00000308466 HIST1H4AP62805 103 aaKnown RBP7.93□□□□□ -1.14
MUC4-201ENST00000308466 RHOHQ15669 191 aa7.93□□□□□ -1.14
MUC4-201ENST00000308466 ZNF702PQ9H963 129 aa7.93□□□□□ -1.14
MUC4-201ENST00000308466 NDUFA11Q86Y39 141 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 M0QY20 66 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 CFC1BP0CG36 223 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 CFC1P0CG37 223 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 DEFB130BP0DP73 79 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 DEFB130AP0DP74 79 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 C20orf203Q8NBC4 194 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 ZNF843Q8N446 348 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 TIMM17AQ99595 171 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
MUC4-201ENST00000308466 POLR2KP53803 58 aaKnown RBP7.91□□□□□ -1.14
MUC4-201ENST00000308466 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
MUC4-201ENST00000308466 BBC3Q96PG8 261 aaPredicted RBP7.91□□□□□ -1.14
MUC4-201ENST00000308466 CRYGDP07320 174 aa7.91□□□□□ -1.14
MUC4-201ENST00000308466 MAP6D1Q9H9H5 199 aa7.91□□□□□ -1.14
MUC4-201ENST00000308466 NOP10Q9NPE3 64 aaKnown RBP7.91□□□□□ -1.14
MUC4-201ENST00000308466 C4orf26Q17RF5 130 aa7.9□□□□□ -1.14
MUC4-201ENST00000308466 A0A1B0GX51 115 aa7.9□□□□□ -1.15
MUC4-201ENST00000308466 LGALS9O00182 355 aa7.9□□□□□ -1.15
MUC4-201ENST00000308466 MRAPQ8TCY5 172 aa7.9□□□□□ -1.15
MUC4-201ENST00000308466 ZMAT4Q9H898 229 aa7.9□□□□□ -1.15
MUC4-201ENST00000308466 UQCRQO14949 82 aa7.89□□□□□ -1.15
MUC4-201ENST00000308466 CLEC2BQ92478 149 aa7.89□□□□□ -1.15
MUC4-201ENST00000308466 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
MUC4-201ENST00000308466 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.89□□□□□ -1.15
MUC4-201ENST00000308466 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
MUC4-201ENST00000308466 TRBV27A0A0K0K1C4 114 aa7.89□□□□□ -1.15
MUC4-201ENST00000308466 HTN3P15516 51 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 ZNF22P17026 224 aaPredicted RBP7.88□□□□□ -1.15
MUC4-201ENST00000308466 DEFB114Q30KQ6 69 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 DNAJC9-AS1A6NH13 148 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 Q6ZSV7 163 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 PRIMA1Q86XR5 153 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 ODF3Q96PU9 254 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 C4orf3Q8WVX3 66 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 HECTD1Q9ULT8 2610 aa7.88□□□□□ -1.15
MUC4-201ENST00000308466 BRK1Q8WUW1 75 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 C9orf85Q96MD7 179 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 HELZ2Q9BYK8 2649 aaKnown RBP7.87□□□□□ -1.15
MUC4-201ENST00000308466 LEPROTO15243 131 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 SVEP1Q4LDE5 3571 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 LRRC75A-AS1Q8N1F1 130 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 DAND5Q8N907 189 aa7.87□□□□□ -1.15
MUC4-201ENST00000308466 C11orf68Q9H3H3 251 aaKnown RBP7.87□□□□□ -1.15
MUC4-201ENST00000308466 HRNRQ86YZ3 2850 aaPredicted RBP7.87□□□□□ -1.15
MUC4-201ENST00000308466 DNAL4O96015 105 aa7.86□□□□□ -1.15
MUC4-201ENST00000308466 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
MUC4-201ENST00000308466 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
MUC4-201ENST00000308466 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
MUC4-201ENST00000308466 FLNAP21333 2647 aaKnown RBP7.86□□□□□ -1.15
MUC4-201ENST00000308466 IGLV4-3A0A075B6K6 122 aa7.86□□□□□ -1.15
MUC4-201ENST00000308466 A0A0J9YY99 117 aa7.86□□□□□ -1.15
MUC4-201ENST00000308466 TSHBP01222 138 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 S100A7L2Q5SY68 101 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 ZNF575Q86XF7 245 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 MUC4Q99102 2169 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 IGHV3-30-3P0DP02 117 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 KIF25-AS1Q9Y6Z4 181 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 KLK9Q2XQG4 91 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 Q6ZTI0 123 aa7.85□□□□□ -1.15
MUC4-201ENST00000308466 FLNBO75369 2602 aaKnown RBP7.84□□□□□ -1.15
MUC4-201ENST00000308466 TRBV10-2A0A0K0K1G8 114 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 A8MZ25 164 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 A0A096LPF7 62 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 CMC4P56277 68 aaPredicted RBP7.84□□□□□ -1.15
MUC4-201ENST00000308466 V9GYY9 64 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 LINC00158P58513 81 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 LINC00315P59091 139 aa7.84□□□□□ -1.15
MUC4-201ENST00000308466 J3QKU1 62 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 LINC00467Q9BRT7 94 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 ITPR3Q14573 2671 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 Q9H8V8 135 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 Q6Q795 121 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 WFDC10AQ9H1F0 79 aa7.83□□□□□ -1.16
MUC4-201ENST00000308466 FAM19A4Q96LR4 140 aa7.82□□□□□ -1.16
MUC4-201ENST00000308466 TINCRA0A1B0GVN0 87 aa7.82□□□□□ -1.16
MUC4-201ENST00000308466 SDIM1Q6ZPB5 146 aa7.82□□□□□ -1.16
MUC4-201ENST00000308466 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
MUC4-201ENST00000308466 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
MUC4-201ENST00000308466 LINC01546A6NGU7 62 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 UBE2D3P61077 147 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 UBE2D2P62837 147 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 CDKN2A-AS1Q9UH64 79 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 COPS9Q8WXC6 57 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 ZNF580Q9UK33 172 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 TEX15Q9BXT5 2789 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
MUC4-201ENST00000308466 NXPH4O95158 308 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms