RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CCKP06307 115 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 C6orf99Q4VX62 202 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 KRTAP27-1Q3LI81 207 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 MBD6Q96DN6 1003 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 IGLV4-3A0A075B6K6 122 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 TMEM89A2RUT3 159 aa9.45□□□□□ -0.9
USP38-201ENST00000307017 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 BBC3Q96PG8 261 aaPredicted RBP9.44□□□□□ -0.9
USP38-201ENST00000307017 PRR14LQ5THK1 2151 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 TIMM17BO60830 172 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
USP38-201ENST00000307017 BRWD1-AS2P59051 145 aa9.43□□□□□ -0.9
USP38-201ENST00000307017 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
USP38-201ENST00000307017 V9GYY9 64 aa9.43□□□□□ -0.9
USP38-201ENST00000307017 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
USP38-201ENST00000307017 CEP192Q8TEP8 1941 aa9.43□□□□□ -0.9
USP38-201ENST00000307017 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
USP38-201ENST00000307017 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
USP38-201ENST00000307017 H3BT86 120 aa9.42□□□□□ -0.9
USP38-201ENST00000307017 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
USP38-201ENST00000307017 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
USP38-201ENST00000307017 M0QXV9 152 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 A0A087WVE0 104 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 PRR9Q5T870 116 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 CFAP126Q5VTH2 177 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 SMIM11BQ8TCY0 68 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
USP38-201ENST00000307017 Q9UF83 564 aa9.4□□□□□ -0.9
USP38-201ENST00000307017 PSPHP1O15172 72 aa9.4□□□□□ -0.9
USP38-201ENST00000307017 UQCRQO14949 82 aa9.4□□□□□ -0.9
USP38-201ENST00000307017 XGP55808 180 aa9.4□□□□□ -0.91
USP38-201ENST00000307017 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.91
USP38-201ENST00000307017 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.91
USP38-201ENST00000307017 MDFIQ99750 246 aa9.39□□□□□ -0.91
USP38-201ENST00000307017 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
USP38-201ENST00000307017 IGLV1-47P01700 117 aa9.38□□□□□ -0.91
USP38-201ENST00000307017 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
USP38-201ENST00000307017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.38□□□□□ -0.91
USP38-201ENST00000307017 RBX1P62877 108 aa9.38□□□□□ -0.91
USP38-201ENST00000307017 PIP4P1Q86T03 277 aa9.37□□□□□ -0.91
USP38-201ENST00000307017 Q6ZQY7 126 aa9.37□□□□□ -0.91
USP38-201ENST00000307017 C2orf91Q6ZV80 131 aa9.37□□□□□ -0.91
USP38-201ENST00000307017 A6NDX4 124 aa9.37□□□□□ -0.91
USP38-201ENST00000307017 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 H7C423 109 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 IGLV2-11P01706 119 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 PCOTHQ58A44 107 aa9.36□□□□□ -0.91
USP38-201ENST00000307017 SMR3AQ99954 134 aa9.35□□□□□ -0.91
USP38-201ENST00000307017 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
USP38-201ENST00000307017 LY6LH3BQJ8 138 aa9.35□□□□□ -0.91
USP38-201ENST00000307017 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
USP38-201ENST00000307017 A8MTW9 85 aa9.35□□□□□ -0.91
USP38-201ENST00000307017 M0QY20 66 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 COX6A2Q02221 97 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 DSCAMO60469 2012 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 UFSP1Q6NVU6 142 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 ZNF843Q8N446 348 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 C11orf21Q9P2W6 132 aa9.34□□□□□ -0.91
USP38-201ENST00000307017 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
USP38-201ENST00000307017 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
USP38-201ENST00000307017 A0A087WYN8 130 aa9.33□□□□□ -0.92
USP38-201ENST00000307017 Q8NA96 180 aa9.33□□□□□ -0.92
USP38-201ENST00000307017 SORL1Q92673 2214 aa9.32□□□□□ -0.92
USP38-201ENST00000307017 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
USP38-201ENST00000307017 TSHBP01222 138 aa9.32□□□□□ -0.92
USP38-201ENST00000307017 DEFB114Q30KQ6 69 aa9.32□□□□□ -0.92
USP38-201ENST00000307017 K7EMT4 169 aa9.31□□□□□ -0.92
USP38-201ENST00000307017 CRIP3Q6Q6R5 217 aa9.31□□□□□ -0.92
USP38-201ENST00000307017 CACNA1HO95180 2353 aa9.31□□□□□ -0.92
USP38-201ENST00000307017 FSHBP01225 129 aa9.31□□□□□ -0.92
USP38-201ENST00000307017 MUC4Q99102 2169 aa9.3□□□□□ -0.92
USP38-201ENST00000307017 MYCNOSP40205 109 aa9.3□□□□□ -0.92
USP38-201ENST00000307017 ESRGQ1W209 222 aa9.3□□□□□ -0.92
USP38-201ENST00000307017 MIFP14174 115 aa9.3□□□□□ -0.92
USP38-201ENST00000307017 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
USP38-201ENST00000307017 EBI3Q14213 229 aa9.29□□□□□ -0.92
USP38-201ENST00000307017 NRACQ8N912 160 aa9.29□□□□□ -0.92
USP38-201ENST00000307017 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
USP38-201ENST00000307017 RNASE3P12724 160 aaKnown RBP9.28□□□□□ -0.92
USP38-201ENST00000307017 HILS1P60008 231 aa9.28□□□□□ -0.92
USP38-201ENST00000307017 PMAIP1Q13794 54 aa9.27□□□□□ -0.92
USP38-201ENST00000307017 IGLV4-69A0A075B6H9 119 aa9.27□□□□□ -0.93
USP38-201ENST00000307017 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
USP38-201ENST00000307017 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
USP38-201ENST00000307017 BRI3O95415 125 aa9.27□□□□□ -0.93
USP38-201ENST00000307017 LRP4O75096 1905 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 K7EQG2 157 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 LINC00337Q8N6G1 96 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms