RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
LONRF3-201ENST00000304778 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
LONRF3-201ENST00000304778 PDZD2O15018 2839 aa11.82□□□□□ -0.52
LONRF3-201ENST00000304778 TMEM86BQ8N661 226 aa11.82□□□□□ -0.52
LONRF3-201ENST00000304778 FAM236AA0A1B0GUQ0 79 aa11.82□□□□□ -0.52
LONRF3-201ENST00000304778 FAM236BA0A1B0GV22 79 aa11.82□□□□□ -0.52
LONRF3-201ENST00000304778 LOC107984640A0A0U1RRK4 108 aa11.81□□□□□ -0.52
LONRF3-201ENST00000304778 DNAJC9-AS1A6NH13 148 aa11.81□□□□□ -0.52
LONRF3-201ENST00000304778 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
LONRF3-201ENST00000304778 Q6ZSV7 163 aa11.81□□□□□ -0.52
LONRF3-201ENST00000304778 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
LONRF3-201ENST00000304778 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
LONRF3-201ENST00000304778 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
LONRF3-201ENST00000304778 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
LONRF3-201ENST00000304778 NPC2P61916 151 aa11.8□□□□□ -0.52
LONRF3-201ENST00000304778 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
LONRF3-201ENST00000304778 TRBV7-7A0A0K0K1E9 115 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 I3L3M4 83 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
LONRF3-201ENST00000304778 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 DNAJC30Q96LL9 226 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 ESM1Q9NQ30 184 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 NACAE9PAV3 2078 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
LONRF3-201ENST00000304778 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
LONRF3-201ENST00000304778 TMEM101Q96IK0 257 aa11.78□□□□□ -0.52
LONRF3-201ENST00000304778 M0R2P5 195 aa11.78□□□□□ -0.52
LONRF3-201ENST00000304778 LEPROTO15243 131 aa11.78□□□□□ -0.52
LONRF3-201ENST00000304778 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
LONRF3-201ENST00000304778 CLEC2BQ92478 149 aa11.78□□□□□ -0.52
LONRF3-201ENST00000304778 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.53
LONRF3-201ENST00000304778 FAM240AA0A1B0GVK7 77 aa11.77□□□□□ -0.53
LONRF3-201ENST00000304778 H3BT86 120 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 ICOSQ9Y6W8 199 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 A8MZ25 164 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 PRSS2P07478 247 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 NDUFA7O95182 113 aa11.76□□□□□ -0.53
LONRF3-201ENST00000304778 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
LONRF3-201ENST00000304778 A0A0J9YXV3 536 aa11.75□□□□□ -0.53
LONRF3-201ENST00000304778 RBMY1A1P0DJD3 496 aaKnown RBP11.75□□□□□ -0.53
LONRF3-201ENST00000304778 RBMY1CP0DJD4 496 aa11.75□□□□□ -0.53
LONRF3-201ENST00000304778 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
LONRF3-201ENST00000304778 C5orf47Q569G3 176 aa11.75□□□□□ -0.53
LONRF3-201ENST00000304778 EDA2RQ9HAV5 297 aa11.75□□□□□ -0.53
LONRF3-201ENST00000304778 PEMTQ9UBM1 199 aa11.75□□□□□ -0.53
LONRF3-201ENST00000304778 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
LONRF3-201ENST00000304778 NOTCH3Q9UM47 2321 aa11.74□□□□□ -0.53
LONRF3-201ENST00000304778 HERVK_113P63121 156 aa11.74□□□□□ -0.53
LONRF3-201ENST00000304778 C3orf22Q8N5N4 141 aa11.74□□□□□ -0.53
LONRF3-201ENST00000304778 A0A0J9YXY3 114 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 COX6CP09669 75 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 SPXQ9BT56 116 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 DEFB131AP59861 70 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 DEFB121Q5J5C9 76 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
LONRF3-201ENST00000304778 PRM2P04554 102 aa11.72□□□□□ -0.53
LONRF3-201ENST00000304778 PYGO1Q9Y3Y4 419 aa11.72□□□□□ -0.53
LONRF3-201ENST00000304778 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
LONRF3-201ENST00000304778 A0A1W2PRX2 142 aa11.71□□□□□ -0.53
LONRF3-201ENST00000304778 SMIM9A6NGZ8 99 aa11.71□□□□□ -0.54
LONRF3-201ENST00000304778 Q9UF83 564 aa11.71□□□□□ -0.54
LONRF3-201ENST00000304778 CD28P10747 220 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 HTN1P15515 57 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
LONRF3-201ENST00000304778 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 A8MTW9 85 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 LST1O00453 97 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 NF1P21359 2839 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 UQCRQO14949 82 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 ADAMTSL4-AS1Q5T5F5 129 aa11.7□□□□□ -0.54
LONRF3-201ENST00000304778 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
LONRF3-201ENST00000304778 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 IMUPQ9GZP8 106 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 PROK1P58294 105 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 MRPS36P82909 103 aaKnown RBP11.69□□□□□ -0.54
LONRF3-201ENST00000304778 DAND5Q8N907 189 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 LITAFQ99732 161 aa11.69□□□□□ -0.54
LONRF3-201ENST00000304778 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
LONRF3-201ENST00000304778 SMR3AQ99954 134 aa11.68□□□□□ -0.54
LONRF3-201ENST00000304778 J3KT08 172 aa11.68□□□□□ -0.54
LONRF3-201ENST00000304778 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
LONRF3-201ENST00000304778 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
LONRF3-201ENST00000304778 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
LONRF3-201ENST00000304778 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
LONRF3-201ENST00000304778 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
LONRF3-201ENST00000304778 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
LONRF3-201ENST00000304778 HIVEP2P31629 2446 aa11.67□□□□□ -0.54
LONRF3-201ENST00000304778 RNASE1P07998 156 aaKnown RBP11.67□□□□□ -0.54
LONRF3-201ENST00000304778 PIK3CD-AS1Q5SR53 167 aa11.67□□□□□ -0.54
LONRF3-201ENST00000304778 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
LONRF3-201ENST00000304778 CITED2Q99967 270 aaPredicted RBP11.67□□□□□ -0.54
LONRF3-201ENST00000304778 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
LONRF3-201ENST00000304778 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms