RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 MGPP08493 103 aa11.97□□□□□ -0.49
TMEM88-201ENST00000301599 CTAG1AP78358 180 aa11.97□□□□□ -0.49
TMEM88-201ENST00000301599 Q6ZSA8 131 aa11.97□□□□□ -0.49
TMEM88-201ENST00000301599 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
TMEM88-201ENST00000301599 TRBV25-1A0A075B6N4 114 aa11.96□□□□□ -0.49
TMEM88-201ENST00000301599 C14orf177Q52M58 125 aa11.96□□□□□ -0.49
TMEM88-201ENST00000301599 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
TMEM88-201ENST00000301599 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.49
TMEM88-201ENST00000301599 NTF3P20783 257 aa11.95□□□□□ -0.5
TMEM88-201ENST00000301599 AMTP48728 403 aa11.95□□□□□ -0.5
TMEM88-201ENST00000301599 MIAQ16674 131 aa11.95□□□□□ -0.5
TMEM88-201ENST00000301599 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
TMEM88-201ENST00000301599 SUMO4Q6EEV6 95 aa11.95□□□□□ -0.5
TMEM88-201ENST00000301599 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
TMEM88-201ENST00000301599 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
TMEM88-201ENST00000301599 SRRM2Q9UQ35 2752 aaKnown RBP11.95□□□□□ -0.5
TMEM88-201ENST00000301599 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 HSBP1O75506 76 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 CAMPP49913 170 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 RBX1P62877 108 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 GAGE6Q13070 117 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 LINC01620Q4KN68 170 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
TMEM88-201ENST00000301599 VPS13BQ7Z7G8 4022 aa11.93□□□□□ -0.5
TMEM88-201ENST00000301599 LINC00587B1AMM8 73 aa11.93□□□□□ -0.5
TMEM88-201ENST00000301599 DDTP30046 118 aa11.93□□□□□ -0.5
TMEM88-201ENST00000301599 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
TMEM88-201ENST00000301599 PLA2G1BP04054 148 aaKnown RBP11.92□□□□□ -0.5
TMEM88-201ENST00000301599 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
TMEM88-201ENST00000301599 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
TMEM88-201ENST00000301599 TWIST1Q15672 202 aa11.91□□□□□ -0.5
TMEM88-201ENST00000301599 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
TMEM88-201ENST00000301599 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
TMEM88-201ENST00000301599 MRPL52Q86TS9 123 aaKnown RBP11.91□□□□□ -0.5
TMEM88-201ENST00000301599 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
TMEM88-201ENST00000301599 NUPR1O60356 82 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 CTRLP40313 264 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 LINC00310P59036 64 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 TEX43Q6ZNM6 134 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
TMEM88-201ENST00000301599 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
TMEM88-201ENST00000301599 C20orf202A1L168 122 aa11.88□□□□□ -0.51
TMEM88-201ENST00000301599 USP17L23D6RBM5 183 aa11.88□□□□□ -0.51
TMEM88-201ENST00000301599 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
TMEM88-201ENST00000301599 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
TMEM88-201ENST00000301599 REG3AQ06141 175 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
TMEM88-201ENST00000301599 PPBPP02775 128 aa11.86□□□□□ -0.51
TMEM88-201ENST00000301599 KRTDAPP60985 99 aa11.86□□□□□ -0.51
TMEM88-201ENST00000301599 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
TMEM88-201ENST00000301599 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
TMEM88-201ENST00000301599 LAMTOR2Q9Y2Q5 125 aa11.86□□□□□ -0.51
TMEM88-201ENST00000301599 DMBT1Q9UGM3 2413 aaPredicted RBP11.86□□□□□ -0.51
TMEM88-201ENST00000301599 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
TMEM88-201ENST00000301599 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
TMEM88-201ENST00000301599 PRSS1P07477 247 aa11.85□□□□□ -0.51
TMEM88-201ENST00000301599 LINC00614P0C842 121 aa11.85□□□□□ -0.51
TMEM88-201ENST00000301599 COTL1Q14019 142 aa11.85□□□□□ -0.51
TMEM88-201ENST00000301599 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
TMEM88-201ENST00000301599 HSPB8Q9UJY1 196 aa11.85□□□□□ -0.51
TMEM88-201ENST00000301599 UBE2L6O14933 153 aa11.84□□□□□ -0.51
TMEM88-201ENST00000301599 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
TMEM88-201ENST00000301599 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
TMEM88-201ENST00000301599 HERC1Q15751 4861 aa11.83□□□□□ -0.51
TMEM88-201ENST00000301599 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
TMEM88-201ENST00000301599 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
TMEM88-201ENST00000301599 IGLV4-60A0A075B6I1 120 aa11.82□□□□□ -0.52
TMEM88-201ENST00000301599 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
TMEM88-201ENST00000301599 FAM104BQ5XKR9 115 aa11.82□□□□□ -0.52
TMEM88-201ENST00000301599 ORMDL3Q8N138 153 aa11.82□□□□□ -0.52
TMEM88-201ENST00000301599 C9orf163Q8N9P6 203 aa11.82□□□□□ -0.52
TMEM88-201ENST00000301599 FA2HQ7L5A8 372 aa11.81□□□□□ -0.52
TMEM88-201ENST00000301599 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
TMEM88-201ENST00000301599 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
TMEM88-201ENST00000301599 TRAV26-2A0A0B4J265 109 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 LEPROTL1O95214 131 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 C14orf144Q96I85 54 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 MIEN1Q9BRT3 115 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 MYCBP2O75592 4640 aa11.8□□□□□ -0.52
TMEM88-201ENST00000301599 PET117Q6UWS5 81 aa11.79□□□□□ -0.52
TMEM88-201ENST00000301599 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
TMEM88-201ENST00000301599 J3QL48 77 aa11.78□□□□□ -0.52
TMEM88-201ENST00000301599 NCR2O95944 276 aa11.78□□□□□ -0.52
TMEM88-201ENST00000301599 RPL39LQ96EH5 51 aaKnown RBP11.78□□□□□ -0.52
TMEM88-201ENST00000301599 FAM19A2Q8N3H0 131 aa11.77□□□□□ -0.53
TMEM88-201ENST00000301599 PRELID3AQ96N28 172 aa11.77□□□□□ -0.53
TMEM88-201ENST00000301599 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 H7C423 109 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 M0R143 59 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 CKS2P33552 79 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
TMEM88-201ENST00000301599 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms