RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 TIMM17BO60830 172 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 P0DMU3 169 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 LINC00643Q86TS7 51 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 POM121L12Q8N7R1 296 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
PCF11-201ENST00000298281 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 FBXL19-AS1Q494R0 122 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 C1orf195Q5TG92 126 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 DNAJC9-AS1A6NH13 148 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 COL4A6Q14031 1691 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 IGLV1-47P01700 117 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 PATE2Q6UY27 113 aa9.15□□□□□ -0.94
PCF11-201ENST00000298281 IGLC6P0CF74 106 aa9.15□□□□□ -0.95
PCF11-201ENST00000298281 MIFP14174 115 aa9.14□□□□□ -0.95
PCF11-201ENST00000298281 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
PCF11-201ENST00000298281 IGLV2-11P01706 119 aa9.14□□□□□ -0.95
PCF11-201ENST00000298281 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
PCF11-201ENST00000298281 PRLHP81277 87 aa9.14□□□□□ -0.95
PCF11-201ENST00000298281 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 MIAQ16674 131 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 CEMP1Q6PRD7 247 aaPredicted RBP9.13□□□□□ -0.95
PCF11-201ENST00000298281 ODF3Q96PU9 254 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 A0A0J9YX75 114 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
PCF11-201ENST00000298281 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 C22orf34Q6ZV56 151 aa9.12□□□□□ -0.95
PCF11-201ENST00000298281 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 UQCRQO14949 82 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 H7C423 109 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 RITA1Q96K30 269 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 ADAMTS20P59510 1910 aa9.11□□□□□ -0.95
PCF11-201ENST00000298281 FXYD2P54710 66 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 NANOS2P60321 138 aaKnown RBP9.1□□□□□ -0.95
PCF11-201ENST00000298281 IGHV6-1A0A0B4J1U7 121 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 DEFB1P60022 68 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 DHRS4-AS1Q9P1J3 65 aa9.1□□□□□ -0.95
PCF11-201ENST00000298281 SPRNQ5BIV9 151 aa9.09□□□□□ -0.95
PCF11-201ENST00000298281 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
PCF11-201ENST00000298281 TNFRSF13BO14836 293 aaPredicted RBP9.09□□□□□ -0.95
PCF11-201ENST00000298281 IGLV2-14P01704 120 aa9.09□□□□□ -0.96
PCF11-201ENST00000298281 C20orf173Q96LM9 149 aa9.09□□□□□ -0.96
PCF11-201ENST00000298281 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
PCF11-201ENST00000298281 Q8N7P7 452 aa9.08□□□□□ -0.96
PCF11-201ENST00000298281 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
PCF11-201ENST00000298281 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
PCF11-201ENST00000298281 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
PCF11-201ENST00000298281 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
PCF11-201ENST00000298281 PTH2Q96A98 100 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 COL5A1P20908 1838 aaPredicted RBP9.07□□□□□ -0.96
PCF11-201ENST00000298281 SHISA2Q6UWI4 295 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 RNF185Q96GF1 192 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 Q6ZTI0 123 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 LINC00482Q8N8I6 264 aa9.07□□□□□ -0.96
PCF11-201ENST00000298281 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 C19orf71A6NCJ1 209 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 ACANP16112 2415 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 ATP5EP2Q5VTU8 51 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 A0A1B0GXF2 115 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 KPRPQ5T749 579 aaPredicted RBP9.06□□□□□ -0.96
PCF11-201ENST00000298281 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
PCF11-201ENST00000298281 Q6ZQY7 126 aa9.05□□□□□ -0.96
PCF11-201ENST00000298281 HIVEP3Q5T1R4 2406 aa9.05□□□□□ -0.96
PCF11-201ENST00000298281 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
PCF11-201ENST00000298281 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
PCF11-201ENST00000298281 ACYP2P14621 99 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 FSTL3O95633 263 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 LST1O00453 97 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 MT-ATP8P03928 68 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
PCF11-201ENST00000298281 UNQ9165/PRO28630Q6UXU0 137 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 Q8N976 141 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 TRBV6-5A0A0K0K1A5 114 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 LINC00208Q96KT6 92 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 LINC00574Q9H8X3 128 aa9.03□□□□□ -0.96
PCF11-201ENST00000298281 NUPR1O60356 82 aa9.02□□□□□ -0.96
PCF11-201ENST00000298281 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.96
PCF11-201ENST00000298281 EBI3Q14213 229 aa9.02□□□□□ -0.97
PCF11-201ENST00000298281 IBA57-AS1B1ANH7 110 aa9.02□□□□□ -0.97
PCF11-201ENST00000298281 CRYGAP11844 174 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 M0R378 163 aa9.01□□□□□ -0.97
PCF11-201ENST00000298281 PSPHP1O15172 72 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms