RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 ANKRD39Q53RE8 183 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 COX17Q14061 63 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 Q6ZUT4 128 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 RNF185Q96GF1 192 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 TEP1Q99973 2627 aaKnown RBP3.07□□□□□ -1.92
SCN3A-201ENST00000283254 DENND4AQ7Z401 1863 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 INAFM1C9JVW0 142 aa3.07□□□□□ -1.92
SCN3A-201ENST00000283254 UBE2D2P62837 147 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 FAM19A5Q7Z5A7 132 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-201ENST00000283254 TRBV6-8A0A0A6YYG3 113 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 M0R378 163 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 PRAC2D3DTV9 90 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 TIMM17BO60830 172 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 LELP1Q5T871 98 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 Q6JHZ5 121 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 Q6ZSV7 163 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 IGKV1D-37A0A075B6S9 117 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 LY6LH3BQJ8 138 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 Q8NA96 180 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 AGRNO00468 2067 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 IGLV4-69A0A075B6H9 119 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 TRAV23DV6A0A075B6W5 121 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 NDUFA7O95182 113 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 PYGO1Q9Y3Y4 419 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 HCFC1P51610 2035 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 TRBV30A0A0K0K1B3 111 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 WIPF3A6NGB9 483 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 B5MCH6 92 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 F8WDY8 70 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 ZNF73O43830 326 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-201ENST00000283254 ARHGAP21Q5T5U3 1957 aa3.06□□□□□ -1.92
SCN3A-201ENST00000283254 FOXI1Q12951 378 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 PSMG3-AS1Q96PY0 264 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 FXYD2P54710 66 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 CLEC2BQ92478 149 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 FAM240AA0A1B0GVK7 77 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 IGLC6P0CF74 106 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 KPRPQ5T749 579 aaPredicted RBP3.05□□□□□ -1.92
SCN3A-201ENST00000283254 CDPF1Q6NVV7 123 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 COL6A5A8TX70 2615 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 OBSL1O75147 1896 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 PRYO14603 147 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 CFAP126Q5VTH2 177 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 C9orf85Q96MD7 179 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 RBX1P62877 108 aa3.05□□□□□ -1.92
SCN3A-201ENST00000283254 TEX49A0A1B0GTD5 131 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 P0C879 139 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 CDKN2A-AS1Q9UH64 79 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 A0A096LNI7 61 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 LINC00308Q8TCZ7 52 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 FLNAP21333 2647 aaKnown RBP3.04□□□□□ -1.92
SCN3A-201ENST00000283254 FAM236DA0A1B0GTK5 79 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 UQCRQO14949 82 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 FAM236CP0DP71 79 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 LY6G6CO95867 125 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 EGFEM1PQ0D2K5 195 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 C2orf16Q68DN1 1984 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 TRBV27A0A0K0K1C4 114 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 G3V4G9 280 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 PRB2P02812 416 aaPredicted RBP3.04□□□□□ -1.92
SCN3A-201ENST00000283254 SERP2Q8N6R1 65 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 NEXN-AS1Q8NBZ9 246 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 M0QY20 66 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.04□□□□□ -1.92
SCN3A-201ENST00000283254 C1orf158Q8N1D5 194 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 RITA1Q96K30 269 aa3.04□□□□□ -1.92
SCN3A-201ENST00000283254 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.03□□□□□ -1.92
SCN3A-201ENST00000283254 LY6G6DO95868 133 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 MRPS36P82909 103 aaKnown RBP3.03□□□□□ -1.92
SCN3A-201ENST00000283254 TP73-AS1Q9UF72 201 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 LINC00467Q9BRT7 94 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 ZNF22P17026 224 aaPredicted RBP3.03□□□□□ -1.92
SCN3A-201ENST00000283254 SPINK6Q6UWN8 80 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 WFDC10BQ8IUB3 73 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 LINC01006Q8NI28 216 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 ASPHD1Q5U4P2 390 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 TNRC6BQ9UPQ9 1833 aaKnown RBP3.03□□□□□ -1.92
SCN3A-201ENST00000283254 TRBV6-5A0A0K0K1A5 114 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 Q6ZQY7 126 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 Q8IZM0 81 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 ZNF843Q8N446 348 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 CLUHP3Q96NS8 147 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 ZNF580Q9UK33 172 aa3.03□□□□□ -1.92
SCN3A-201ENST00000283254 IMUPQ9GZP8 106 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 STAB2Q8WWQ8 2551 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 DENND4CQ5VZ89 1909 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 LST1O00453 97 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 C20orf197Q8N268 126 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 LINC00482Q8N8I6 264 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 MBD6Q96DN6 1003 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 PLAC8L1A1L4L8 177 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 KLLNB2CW77 178 aa3.02□□□□□ -1.93
SCN3A-201ENST00000283254 ZFAND3Q9H8U3 227 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms