RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-201ENST00000282516 SLX1AQ9BQ83 275 aa6.63□□□□□ -1.35
NIPBL-201ENST00000282516 SPINK6Q6UWN8 80 aa6.63□□□□□ -1.35
NIPBL-201ENST00000282516 TRIAP1O43715 76 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 ODF3L1Q8IXM7 274 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 PATE2Q6UY27 113 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 Q6ZVQ6 151 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 PROK2Q9HC23 129 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 C11orf53Q8IXP5 236 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 LINC00467Q9BRT7 94 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 MAP6D1Q9H9H5 199 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 RITA1Q96K30 269 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 CPAMD8Q8IZJ3 1885 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
NIPBL-201ENST00000282516 TRBV30A0A0K0K1B3 111 aa6.61□□□□□ -1.35
NIPBL-201ENST00000282516 TRBV6-5A0A0K0K1A5 114 aa6.61□□□□□ -1.35
NIPBL-201ENST00000282516 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
NIPBL-201ENST00000282516 LINC00322Q6ZN03 302 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-201ENST00000282516 SLPIP03973 132 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 LRRC75A-AS1Q8N1F1 130 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 SYCNQ0VAF6 134 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-201ENST00000282516 SMIM26A0A096LP01 95 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 IGHV4-30-4P0DP06 118 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 IGHV4-31P0DP07 118 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 MIFP14174 115 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 PRR4Q16378 134 aa6.6□□□□□ -1.35
NIPBL-201ENST00000282516 ANKRD17O75179 2603 aaKnown RBP6.6□□□□□ -1.35
NIPBL-201ENST00000282516 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 DNAJC9-AS1A6NH13 148 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 WFDC10AQ9H1F0 79 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 LY6G6EA0A0G2JKS1 128 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 U3KQA8 63 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 COX17Q14061 63 aa6.59□□□□□ -1.35
NIPBL-201ENST00000282516 M0R378 163 aa6.59□□□□□ -1.36
NIPBL-201ENST00000282516 COX7CP15954 63 aa6.59□□□□□ -1.36
NIPBL-201ENST00000282516 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.36
NIPBL-201ENST00000282516 A0A1B0GXF2 115 aa6.58□□□□□ -1.36
NIPBL-201ENST00000282516 LINC01548A6NM66 108 aa6.58□□□□□ -1.36
NIPBL-201ENST00000282516 RSPO1Q2MKA7 263 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-201ENST00000282516 Q6ZTI0 123 aa6.58□□□□□ -1.36
NIPBL-201ENST00000282516 GRNP28799 593 aaKnown RBP6.58□□□□□ -1.36
NIPBL-201ENST00000282516 HRCT1Q6UXD1 115 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-201ENST00000282516 KRTAP27-1Q3LI81 207 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 C10orf25Q5T742 122 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 Q6JHZ5 121 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 DCANP1Q8TF63 244 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 IGKV2-28A0A075B6P5 120 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 IGKV2D-28P01615 120 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 COL4A6Q14031 1691 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 LY6LH3BQJ8 138 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 C6orf99Q4VX62 202 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 MUC7Q8TAX7 377 aa6.57□□□□□ -1.36
NIPBL-201ENST00000282516 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 XAGE1AQ9HD64 81 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 ZNF73O43830 326 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-201ENST00000282516 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 ANKRD11Q6UB99 2663 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-201ENST00000282516 IGLV4-3A0A075B6K6 122 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 Q6ZQY7 126 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 CFAP126Q5VTH2 177 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 FAM30AQ9NZY2 134 aa6.56□□□□□ -1.36
NIPBL-201ENST00000282516 USP9YO00507 2555 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-201ENST00000282516 TRBV6-8A0A0A6YYG3 113 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 ESRGQ1W209 222 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 ZFAND3Q9H8U3 227 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 TRAV10A0A0B4J240 114 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
NIPBL-201ENST00000282516 PLA2G2CQ5R387 149 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 DEFB1P60022 68 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 DAZAP2Q15038 168 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-201ENST00000282516 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 LST1O00453 97 aa6.55□□□□□ -1.36
NIPBL-201ENST00000282516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-201ENST00000282516 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-201ENST00000282516 POLQO75417 2590 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 ZFP36P26651 326 aaKnown RBP6.54□□□□□ -1.36
NIPBL-201ENST00000282516 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 SPRNQ5BIV9 151 aa6.54□□□□□ -1.36
NIPBL-201ENST00000282516 COL5A1P20908 1838 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-201ENST00000282516 RNF185Q96GF1 192 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 M0QY20 66 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 U3KQK5 164 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 USP24Q9UPU5 2620 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 A6NDX4 124 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
NIPBL-201ENST00000282516 TRBV6-4A0A1B0GX49 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms