RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 Q6ZR03 302 aa12.01□□□□□ -0.49
UBR3-201ENST00000272793 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
UBR3-201ENST00000272793 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
UBR3-201ENST00000272793 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
UBR3-201ENST00000272793 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
UBR3-201ENST00000272793 C6orf99Q4VX62 202 aa12□□□□□ -0.49
UBR3-201ENST00000272793 TRIAP1O43715 76 aa12□□□□□ -0.49
UBR3-201ENST00000272793 LINC01547P58512 204 aaPredicted RBP12□□□□□ -0.49
UBR3-201ENST00000272793 HILS1P60008 231 aa12□□□□□ -0.49
UBR3-201ENST00000272793 K7ENP7 123 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 TMEM254Q8TBM7 123 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 IGLV3-19P01714 112 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 CR1P17927 2039 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 PLAC8L1A1L4L8 177 aa11.99□□□□□ -0.49
UBR3-201ENST00000272793 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 C15orf65H3BRN8 121 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 IMUPQ9GZP8 106 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 PATE2Q6UY27 113 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 SPRY4Q9C004 299 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 ZNF73O43830 326 aaPredicted RBP11.98□□□□□ -0.49
UBR3-201ENST00000272793 DEFB1P60022 68 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 PCSK5Q92824 1860 aa11.98□□□□□ -0.49
UBR3-201ENST00000272793 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
UBR3-201ENST00000272793 PRSS33Q8NF86 280 aa11.97□□□□□ -0.49
UBR3-201ENST00000272793 CRIPAKQ8N1N5 446 aa11.97□□□□□ -0.49
UBR3-201ENST00000272793 SMIM9A6NGZ8 99 aa11.97□□□□□ -0.49
UBR3-201ENST00000272793 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
UBR3-201ENST00000272793 CTSZQ9UBR2 303 aa11.96□□□□□ -0.49
UBR3-201ENST00000272793 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
UBR3-201ENST00000272793 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.49
UBR3-201ENST00000272793 LY6G6CO95867 125 aa11.96□□□□□ -0.49
UBR3-201ENST00000272793 LINC00311Q8N616 119 aa11.96□□□□□ -0.5
UBR3-201ENST00000272793 C4orf3Q8WVX3 66 aa11.96□□□□□ -0.5
UBR3-201ENST00000272793 TRAV7A0A075B6U4 112 aa11.96□□□□□ -0.5
UBR3-201ENST00000272793 RITA1Q96K30 269 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 H0Y9P7 68 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 PROK2Q9HC23 129 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
UBR3-201ENST00000272793 ZNF503-AS2A6NEH8 195 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
UBR3-201ENST00000272793 COL18A1P39060 1754 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 CRIP2P52943 208 aaPredicted RBP11.94□□□□□ -0.5
UBR3-201ENST00000272793 INSL3P51460 131 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 Q8TCH9 128 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 ACYP2P14621 99 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
UBR3-201ENST00000272793 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
UBR3-201ENST00000272793 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
UBR3-201ENST00000272793 A0A1B0GU69 56 aa11.93□□□□□ -0.5
UBR3-201ENST00000272793 TRBV7-7A0A0K0K1E9 115 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 ZNF843Q8N446 348 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 PRAC2D3DTV9 90 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 COL4A1P02462 1669 aa11.92□□□□□ -0.5
UBR3-201ENST00000272793 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 IGLV8-61A0A075B6I0 122 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 CLUHP3Q96NS8 147 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 IBA57-AS1B1ANH7 110 aa11.91□□□□□ -0.5
UBR3-201ENST00000272793 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
UBR3-201ENST00000272793 Q6ZS92 163 aa11.9□□□□□ -0.5
UBR3-201ENST00000272793 NHSL1Q5SYE7 1610 aa11.9□□□□□ -0.5
UBR3-201ENST00000272793 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
UBR3-201ENST00000272793 SMIM11BQ8TCY0 68 aa11.9□□□□□ -0.51
UBR3-201ENST00000272793 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.51
UBR3-201ENST00000272793 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
UBR3-201ENST00000272793 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
UBR3-201ENST00000272793 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
UBR3-201ENST00000272793 NRACQ8N912 160 aa11.88□□□□□ -0.51
UBR3-201ENST00000272793 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
UBR3-201ENST00000272793 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
UBR3-201ENST00000272793 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
UBR3-201ENST00000272793 IGKV2D-30A0A075B6S6 120 aa11.87□□□□□ -0.51
UBR3-201ENST00000272793 IGKV2-30P06310 120 aa11.87□□□□□ -0.51
UBR3-201ENST00000272793 Q9UF83 564 aa11.87□□□□□ -0.51
UBR3-201ENST00000272793 H7C423 109 aa11.87□□□□□ -0.51
UBR3-201ENST00000272793 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
UBR3-201ENST00000272793 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
UBR3-201ENST00000272793 LST1O00453 97 aa11.86□□□□□ -0.51
UBR3-201ENST00000272793 DEFB116Q30KQ4 102 aa11.86□□□□□ -0.51
UBR3-201ENST00000272793 M0R378 163 aa11.85□□□□□ -0.51
UBR3-201ENST00000272793 Q6ZTI0 123 aa11.85□□□□□ -0.51
UBR3-201ENST00000272793 K7EIM0 57 aa11.85□□□□□ -0.51
UBR3-201ENST00000272793 SPRNQ5BIV9 151 aa11.85□□□□□ -0.51
UBR3-201ENST00000272793 LINC00474Q9P2X8 69 aa11.85□□□□□ -0.51
UBR3-201ENST00000272793 I3L2K1 104 aa11.84□□□□□ -0.51
UBR3-201ENST00000272793 K7EMT4 169 aa11.84□□□□□ -0.51
UBR3-201ENST00000272793 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
UBR3-201ENST00000272793 IGLV11-55A0A075B6I3 123 aa11.83□□□□□ -0.51
UBR3-201ENST00000272793 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.51
UBR3-201ENST00000272793 C8orf87E5RJ46 101 aa11.83□□□□□ -0.52
UBR3-201ENST00000272793 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms