RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 F8VRH5 84 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 H7C423 109 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 DPM2O94777 84 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 C11orf45Q8TAV5 145 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
SS18-201ENST00000269137 CHTOPQ9Y3Y2 248 aaKnown RBP9.84□□□□□ -0.83
SS18-201ENST00000269137 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
SS18-201ENST00000269137 Q6ZTC4 211 aa9.83□□□□□ -0.84
SS18-201ENST00000269137 STPG4Q8N801 248 aa9.83□□□□□ -0.84
SS18-201ENST00000269137 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
SS18-201ENST00000269137 H3BNG1 76 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 IGKCP01834 107 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 COX8AP10176 69 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 PLNP26678 52 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
SS18-201ENST00000269137 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
SS18-201ENST00000269137 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
SS18-201ENST00000269137 SH2D6Q7Z4S9 175 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 AMELXQ99217 191 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
SS18-201ENST00000269137 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 VCX2Q9H322 139 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
SS18-201ENST00000269137 FGF6P10767 208 aa9.81□□□□□ -0.84
SS18-201ENST00000269137 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
SS18-201ENST00000269137 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
SS18-201ENST00000269137 ICOSQ9Y6W8 199 aa9.81□□□□□ -0.84
SS18-201ENST00000269137 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
SS18-201ENST00000269137 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
SS18-201ENST00000269137 UBE2L6O14933 153 aa9.79□□□□□ -0.84
SS18-201ENST00000269137 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
SS18-201ENST00000269137 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
SS18-201ENST00000269137 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
SS18-201ENST00000269137 A0A096LPF7 62 aa9.78□□□□□ -0.84
SS18-201ENST00000269137 ZNF25P17030 456 aaPredicted RBP9.78□□□□□ -0.84
SS18-201ENST00000269137 Q6ZUT4 128 aa9.78□□□□□ -0.84
SS18-201ENST00000269137 AMMECR1LQ6DCA0 310 aa9.77□□□□□ -0.84
SS18-201ENST00000269137 OR5A1Q8NGJ0 315 aa9.77□□□□□ -0.84
SS18-201ENST00000269137 CHCHD5Q9BSY4 110 aa9.77□□□□□ -0.84
SS18-201ENST00000269137 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 MPV17L2Q567V2 206 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 NFE4Q86UQ8 179 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
SS18-201ENST00000269137 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
SS18-201ENST00000269137 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
SS18-201ENST00000269137 TIRAPP58753 221 aa9.76□□□□□ -0.85
SS18-201ENST00000269137 GAGE6Q13070 117 aa9.76□□□□□ -0.85
SS18-201ENST00000269137 BOD1L2Q8IYS8 172 aa9.76□□□□□ -0.85
SS18-201ENST00000269137 NHLRC4P0CG21 123 aaPredicted RBP9.75□□□□□ -0.85
SS18-201ENST00000269137 BVES-AS1Q5T3Y7 98 aa9.75□□□□□ -0.85
SS18-201ENST00000269137 TRAV10A0A0B4J240 114 aa9.75□□□□□ -0.85
SS18-201ENST00000269137 DLEU1O43261 78 aa9.75□□□□□ -0.85
SS18-201ENST00000269137 RNASE13Q5GAN3 156 aaKnown RBP9.75□□□□□ -0.85
SS18-201ENST00000269137 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
SS18-201ENST00000269137 LELP1Q5T871 98 aa9.74□□□□□ -0.85
SS18-201ENST00000269137 A0A0J9YXV3 536 aa9.73□□□□□ -0.85
SS18-201ENST00000269137 SIVA1O15304 175 aa9.73□□□□□ -0.85
SS18-201ENST00000269137 UBE2D1P51668 147 aa9.73□□□□□ -0.85
SS18-201ENST00000269137 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
SS18-201ENST00000269137 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
SS18-201ENST00000269137 MEGF8Q7Z7M0 2845 aa9.73□□□□□ -0.85
SS18-201ENST00000269137 TCTAP57738 103 aa9.72□□□□□ -0.85
SS18-201ENST00000269137 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
SS18-201ENST00000269137 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
SS18-201ENST00000269137 NMUP48645 174 aa9.72□□□□□ -0.85
SS18-201ENST00000269137 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
SS18-201ENST00000269137 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.85
SS18-201ENST00000269137 TMEM262E9PQX1 116 aa9.71□□□□□ -0.85
SS18-201ENST00000269137 PCP2Q8IVA1 136 aa9.71□□□□□ -0.85
SS18-201ENST00000269137 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.85
SS18-201ENST00000269137 ZNF22P17026 224 aaPredicted RBP9.7□□□□□ -0.86
SS18-201ENST00000269137 RBX1P62877 108 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 E9PLD3 99 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 SEC11AP67812 179 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
SS18-201ENST00000269137 HERVK_113P61574 105 aa9.69□□□□□ -0.86
SS18-201ENST00000269137 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
SS18-201ENST00000269137 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 LINC00242Q5T6M2 205 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 Q6ZVH6 145 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
SS18-201ENST00000269137 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 TAX1BP3O14907 124 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 HERVK_113P63121 156 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 HSD52Q0P140 79 aa9.68□□□□□ -0.86
SS18-201ENST00000269137 ESRGQ1W209 222 aa9.66□□□□□ -0.86
SS18-201ENST00000269137 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
SS18-201ENST00000269137 COX6A2Q02221 97 aa9.66□□□□□ -0.86
SS18-201ENST00000269137 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
SS18-201ENST00000269137 TTTY13Q9BZ97 58 aa9.65□□□□□ -0.86
SS18-201ENST00000269137 H3BRM9 83 aa9.64□□□□□ -0.87
SS18-201ENST00000269137 CCL25O15444 150 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms