RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 RNF185Q96GF1 192 aa12.54□□□□□ -0.4
TSPAN3-201ENST00000267970 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
TSPAN3-201ENST00000267970 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
TSPAN3-201ENST00000267970 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
TSPAN3-201ENST00000267970 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
TSPAN3-201ENST00000267970 Q6ZS46 218 aa12.53□□□□□ -0.4
TSPAN3-201ENST00000267970 Q6ZSR3 168 aa12.53□□□□□ -0.4
TSPAN3-201ENST00000267970 PLXNB1O43157 2135 aa12.53□□□□□ -0.4
TSPAN3-201ENST00000267970 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.4
TSPAN3-201ENST00000267970 PMAIP1Q13794 54 aa12.52□□□□□ -0.4
TSPAN3-201ENST00000267970 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
TSPAN3-201ENST00000267970 IGLV9-49A0A0B4J1Y8 123 aa12.52□□□□□ -0.41
TSPAN3-201ENST00000267970 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
TSPAN3-201ENST00000267970 SERP2Q8N6R1 65 aa12.51□□□□□ -0.41
TSPAN3-201ENST00000267970 XGP55808 180 aa12.51□□□□□ -0.41
TSPAN3-201ENST00000267970 PCDH15Q96QU1 1955 aa12.5□□□□□ -0.41
TSPAN3-201ENST00000267970 RETNLBQ9BQ08 111 aa12.5□□□□□ -0.41
TSPAN3-201ENST00000267970 SERP1Q9Y6X1 66 aa12.5□□□□□ -0.41
TSPAN3-201ENST00000267970 COL4A3Q01955 1670 aa12.5□□□□□ -0.41
TSPAN3-201ENST00000267970 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
TSPAN3-201ENST00000267970 FAM19A3Q7Z5A8 133 aa12.49□□□□□ -0.41
TSPAN3-201ENST00000267970 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
TSPAN3-201ENST00000267970 M0QY20 66 aa12.48□□□□□ -0.41
TSPAN3-201ENST00000267970 Q6ZSV7 163 aa12.48□□□□□ -0.41
TSPAN3-201ENST00000267970 Q6ZQY7 126 aa12.48□□□□□ -0.41
TSPAN3-201ENST00000267970 INAFM1C9JVW0 142 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 PSPHP1O15172 72 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 P0C879 139 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 PRR9Q5T870 116 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
TSPAN3-201ENST00000267970 Q8N9L7 120 aa12.46□□□□□ -0.41
TSPAN3-201ENST00000267970 TRBV6-8A0A0A6YYG3 113 aa12.46□□□□□ -0.41
TSPAN3-201ENST00000267970 Q8NA96 180 aa12.46□□□□□ -0.41
TSPAN3-201ENST00000267970 C2orf91Q6ZV80 131 aa12.46□□□□□ -0.42
TSPAN3-201ENST00000267970 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.42
TSPAN3-201ENST00000267970 COX7CP15954 63 aa12.45□□□□□ -0.42
TSPAN3-201ENST00000267970 TANC1Q9C0D5 1861 aa12.45□□□□□ -0.42
TSPAN3-201ENST00000267970 ARHGAP32A7KAX9 2087 aa12.44□□□□□ -0.42
TSPAN3-201ENST00000267970 K7EQG2 157 aa12.44□□□□□ -0.42
TSPAN3-201ENST00000267970 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
TSPAN3-201ENST00000267970 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
TSPAN3-201ENST00000267970 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
TSPAN3-201ENST00000267970 EDN2P20800 178 aa12.43□□□□□ -0.42
TSPAN3-201ENST00000267970 LMO4P61968 165 aa12.43□□□□□ -0.42
TSPAN3-201ENST00000267970 CRIP3Q6Q6R5 217 aa12.43□□□□□ -0.42
TSPAN3-201ENST00000267970 A0A087WVE0 104 aa12.43□□□□□ -0.42
TSPAN3-201ENST00000267970 EBI3Q14213 229 aa12.42□□□□□ -0.42
TSPAN3-201ENST00000267970 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
TSPAN3-201ENST00000267970 TSHBP01222 138 aa12.42□□□□□ -0.42
TSPAN3-201ENST00000267970 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
TSPAN3-201ENST00000267970 X6R8D5 127 aa12.42□□□□□ -0.42
TSPAN3-201ENST00000267970 H7C423 109 aa12.41□□□□□ -0.42
TSPAN3-201ENST00000267970 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
TSPAN3-201ENST00000267970 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
TSPAN3-201ENST00000267970 NUP210LQ5VU65 1888 aa12.4□□□□□ -0.42
TSPAN3-201ENST00000267970 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.42
TSPAN3-201ENST00000267970 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
TSPAN3-201ENST00000267970 IGLV2-11P01706 119 aa12.4□□□□□ -0.43
TSPAN3-201ENST00000267970 C9orf116Q5BN46 136 aaPredicted RBP12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 SYCNQ0VAF6 134 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 MIFP14174 115 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 NRACQ8N912 160 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 Q6YL49 198 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 SPRY4Q9C004 299 aa12.39□□□□□ -0.43
TSPAN3-201ENST00000267970 TMEM131Q92545 1883 aa12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 LOC107984640A0A0U1RRK4 108 aa12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 DAZAP2Q15038 168 aaPredicted RBP12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 NDUFC1O43677 76 aa12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
TSPAN3-201ENST00000267970 ATP5EP56381 51 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 U3KQK5 164 aa12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 YPEL4Q96NS1 127 aa12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 PTPRQQ9UMZ3 2332 aa12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 TNFRSF13BO14836 293 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 SPINK1P00995 79 aa12.37□□□□□ -0.43
TSPAN3-201ENST00000267970 SORL1Q92673 2214 aa12.36□□□□□ -0.43
TSPAN3-201ENST00000267970 EIF4EBP1Q13541 118 aaPredicted RBP12.36□□□□□ -0.43
TSPAN3-201ENST00000267970 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
TSPAN3-201ENST00000267970 TMEM89A2RUT3 159 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 UBE2D4Q9Y2X8 147 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 HCFC1P51610 2035 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 LYRM9A8MSI8 78 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 HILS1P60008 231 aa12.35□□□□□ -0.43
TSPAN3-201ENST00000267970 DEFB116Q30KQ4 102 aa12.34□□□□□ -0.43
TSPAN3-201ENST00000267970 Q6ZVQ6 151 aa12.34□□□□□ -0.43
TSPAN3-201ENST00000267970 LINC00959A0A1B0GUT2 108 aa12.34□□□□□ -0.43
TSPAN3-201ENST00000267970 LINC00208Q96KT6 92 aa12.34□□□□□ -0.43
TSPAN3-201ENST00000267970 SMIM26A0A096LP01 95 aa12.33□□□□□ -0.44
TSPAN3-201ENST00000267970 LST1O00453 97 aa12.33□□□□□ -0.44
TSPAN3-201ENST00000267970 UBE2D1P51668 147 aa12.33□□□□□ -0.44
TSPAN3-201ENST00000267970 UBE2D3P61077 147 aa12.31□□□□□ -0.44
TSPAN3-201ENST00000267970 KPRPQ5T749 579 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms