RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
CPSF6-201ENST00000266679 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
CPSF6-201ENST00000266679 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
CPSF6-201ENST00000266679 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 TRAV8-3A0A0A6YYJ7 113 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 F8W1H4 67 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 CFC1P0CG37 223 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
CPSF6-201ENST00000266679 CRYBA4P53673 196 aa9.27□□□□□ -0.93
CPSF6-201ENST00000266679 C10orf126Q8N4M7 172 aa9.27□□□□□ -0.93
CPSF6-201ENST00000266679 Q6ZTI0 123 aa9.27□□□□□ -0.93
CPSF6-201ENST00000266679 ZNF418Q8TF45 676 aaPredicted RBP9.27□□□□□ -0.93
CPSF6-201ENST00000266679 C16orf95Q9H693 158 aa9.27□□□□□ -0.93
CPSF6-201ENST00000266679 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
CPSF6-201ENST00000266679 SPINK8P0C7L1 97 aa9.26□□□□□ -0.93
CPSF6-201ENST00000266679 PSMB2P49721 201 aa9.26□□□□□ -0.93
CPSF6-201ENST00000266679 HILS1P60008 231 aa9.26□□□□□ -0.93
CPSF6-201ENST00000266679 PRO0461Q9UI25 63 aa9.26□□□□□ -0.93
CPSF6-201ENST00000266679 TINCRA0A1B0GVN0 87 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 A4D1N5 150 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
CPSF6-201ENST00000266679 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 TMEM263Q8WUH6 116 aaKnown RBP9.25□□□□□ -0.93
CPSF6-201ENST00000266679 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
CPSF6-201ENST00000266679 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 A8MZ25 164 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 K7EQD1 137 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 CMYA5Q8N3K9 4069 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
CPSF6-201ENST00000266679 UBE2D3P61077 147 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 UBE2D2P62837 147 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 ETDBQ3ZM63 59 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
CPSF6-201ENST00000266679 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
CPSF6-201ENST00000266679 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
CPSF6-201ENST00000266679 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
CPSF6-201ENST00000266679 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
CPSF6-201ENST00000266679 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
CPSF6-201ENST00000266679 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
CPSF6-201ENST00000266679 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
CPSF6-201ENST00000266679 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
CPSF6-201ENST00000266679 GAGE12JA6NER3 117 aa9.22□□□□□ -0.93
CPSF6-201ENST00000266679 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
CPSF6-201ENST00000266679 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
CPSF6-201ENST00000266679 GAGE4Q13068 117 aa9.22□□□□□ -0.93
CPSF6-201ENST00000266679 GAGE5Q13069 117 aa9.22□□□□□ -0.93
CPSF6-201ENST00000266679 LYRM7Q5U5X0 104 aa9.22□□□□□ -0.93
CPSF6-201ENST00000266679 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
CPSF6-201ENST00000266679 H7C2G1 150 aa9.21□□□□□ -0.93
CPSF6-201ENST00000266679 LINC00694P0DN24 101 aa9.21□□□□□ -0.93
CPSF6-201ENST00000266679 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.93
CPSF6-201ENST00000266679 TCL1BO95988 128 aa9.21□□□□□ -0.94
CPSF6-201ENST00000266679 LITAFQ99732 161 aa9.21□□□□□ -0.94
CPSF6-201ENST00000266679 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
CPSF6-201ENST00000266679 GAGE7O76087 117 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 C19orf73Q9NVV2 129 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 VWFP04275 2813 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 TRBV10-1A0A0K0K1A3 114 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 SCGB1C2P0DMR2 95 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
CPSF6-201ENST00000266679 NTM-AS1Q6ZSK4 140 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
CPSF6-201ENST00000266679 A0A0B4J2C4 111 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 NPC2P61916 151 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 COX6A2Q02221 97 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 C3orf56Q8N813 242 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 NDUFA7O95182 113 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 PRSS2P07478 247 aa9.19□□□□□ -0.94
CPSF6-201ENST00000266679 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
CPSF6-201ENST00000266679 INSL3P51460 131 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 TIRAPP58753 221 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 DAZ2Q13117 558 aaKnown RBP9.18□□□□□ -0.94
CPSF6-201ENST00000266679 Q1RN00 199 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
CPSF6-201ENST00000266679 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
CPSF6-201ENST00000266679 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
CPSF6-201ENST00000266679 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 SPANXCQ9NY87 97 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 IGLV5-45A0A087WSX0 123 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 J3QR89 54 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 MIAQ16674 131 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 SBSPONQ8IVN8 264 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
CPSF6-201ENST00000266679 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms