RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 K7EQD1 137 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 TMEM89A2RUT3 159 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 SPRY2O43597 315 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 TIRAPP58753 221 aa4.35□□□□□ -1.71
VCAN-201ENST00000265077 DSPP15924 2871 aaKnown RBP4.35□□□□□ -1.71
VCAN-201ENST00000265077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
VCAN-201ENST00000265077 IGKV2-29A2NJV5 120 aaPredicted RBP4.34□□□□□ -1.71
VCAN-201ENST00000265077 UNC79Q9P2D8 2635 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 IGKV1OR2-108A0A075B7D4 117 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 CD164Q04900 197 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 PIK3CD-AS1Q5SR53 167 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 CTSZQ9UBR2 303 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 HHLA3Q9XRX5 114 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 IGFL2Q6UWQ7 119 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 PLA2G2CQ5R387 149 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 TRANK1O15050 2925 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 IGLV2-23P01705 113 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
VCAN-201ENST00000265077 MRPL36Q9P0J6 103 aaKnown RBP4.34□□□□□ -1.72
VCAN-201ENST00000265077 RNF223E7ERA6 249 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 NHLRC4P0CG21 123 aaPredicted RBP4.33□□□□□ -1.72
VCAN-201ENST00000265077 LINC00322Q6ZN03 302 aaPredicted RBP4.33□□□□□ -1.72
VCAN-201ENST00000265077 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 ETDCA0A1B0GVM5 59 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 OXLD1Q5BKU9 147 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 MYCNOSP40205 109 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 SPRNQ5BIV9 151 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 TRBV10-1A0A0K0K1A3 114 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 ZNF292O60281 2723 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 BRI3O95415 125 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 GYPEP15421 78 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 NREPQ16612 68 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 C5orf56Q8N8D9 126 aa4.33□□□□□ -1.72
VCAN-201ENST00000265077 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
VCAN-201ENST00000265077 IGKV1D-37A0A075B6S9 117 aa4.32□□□□□ -1.72
VCAN-201ENST00000265077 RITA1Q96K30 269 aa4.32□□□□□ -1.72
VCAN-201ENST00000265077 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
VCAN-201ENST00000265077 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
VCAN-201ENST00000265077 PLAC8L1A1L4L8 177 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 IGLV1-47P01700 117 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
VCAN-201ENST00000265077 PIP4P1Q86T03 277 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 FSTL3O95633 263 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 CCL24O00175 119 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 NCR3O14931 201 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 NDUFA1O15239 70 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 Q8N9W7 124 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 CRYGDP07320 174 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
VCAN-201ENST00000265077 ESRGQ1W209 222 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 CRIP2P52943 208 aaPredicted RBP4.31□□□□□ -1.72
VCAN-201ENST00000265077 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 PLA2G5P39877 138 aa4.31□□□□□ -1.72
VCAN-201ENST00000265077 C20orf203Q8NBC4 194 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 EIF4EBP1Q13541 118 aaPredicted RBP4.3□□□□□ -1.72
VCAN-201ENST00000265077 FAM19A4Q96LR4 140 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 DIRC1Q969H9 104 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 A8MZ25 164 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 NDUFB1O75438 58 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 SP5Q6BEB4 398 aaPredicted RBP4.3□□□□□ -1.72
VCAN-201ENST00000265077 A0A087WVE0 104 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 DKK4Q9UBT3 224 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 Q96MF0 132 aa4.3□□□□□ -1.72
VCAN-201ENST00000265077 PSPHP1O15172 72 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 IGKV2D-24A0A075B6R9 120 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 E7EUB6 86 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 CR1P17927 2039 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 PRAC2D3DTV9 90 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 SRCAPQ6ZRS2 3230 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 DEFB121Q5J5C9 76 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 SLURP1P55000 103 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 SBSPONQ8IVN8 264 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 IL17DQ8TAD2 202 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 WT1P19544 449 aaPredicted RBP4.29□□□□□ -1.72
VCAN-201ENST00000265077 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
VCAN-201ENST00000265077 Q6ZS46 218 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 C9orf66Q5T8R8 295 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 A0A0J9YX75 114 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 IGHV4-59P01825 116 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 STAB2Q8WWQ8 2551 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 C4orf3Q8WVX3 66 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 BPY2O14599 106 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 COX7BP24311 80 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 DEFB136Q30KP8 78 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 MIR7-3HGQ8N6C7 128 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 CGB3P0DN86 165 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 CGB7P0DN87 165 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 DEFB112Q30KQ8 113 aa4.28□□□□□ -1.72
VCAN-201ENST00000265077 LAMA2P24043 3122 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms