RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 C11orf45Q8TAV5 145 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 BLCAPP62952 87 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 AMTNQ6UX39 209 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 USP24Q9UPU5 2620 aa3.26□□□□□ -1.89
VPS13C-202ENST00000261517 TMEM61Q8N0U2 210 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 FLNAP21333 2647 aaKnown RBP3.25□□□□□ -1.89
VPS13C-202ENST00000261517 IGLL5B9A064 214 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 GRNP28799 593 aaKnown RBP3.25□□□□□ -1.89
VPS13C-202ENST00000261517 LELP1Q5T871 98 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 LINC00643Q86TS7 51 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 COX7BP24311 80 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 NEXN-AS1Q8NBZ9 246 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 RNF185Q96GF1 192 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 HECTD1Q9ULT8 2610 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 A0A1B0GW54 56 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 HIGD2BQ4VC39 106 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 ITPR3Q14573 2671 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 CD164L2Q6UWJ8 174 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
VPS13C-202ENST00000261517 LINC00322Q6ZN03 302 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-202ENST00000261517 TRAV26-2A0A0B4J265 109 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 NUPR2A6NF83 97 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 F8W735 103 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-202ENST00000261517 C17orf77Q96MU5 243 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 DKK2Q9UBU2 259 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 DMXL1Q9Y485 3027 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 NREPQ16612 68 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 CRIP3Q6Q6R5 217 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 M0QXV9 152 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 M0QY20 66 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 NHLRC4P0CG21 123 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-202ENST00000261517 UBE2AP49459 152 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 TRBV6-8A0A0A6YYG3 113 aa3.24□□□□□ -1.89
VPS13C-202ENST00000261517 V9GYY9 64 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 AKAP13Q12802 2813 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 IGSF10Q6WRI0 2623 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 NBEAL1Q6ZS30 2694 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 IGLV2-8P01709 118 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 RPL18AQ02543 176 aaKnown RBP3.23□□□□□ -1.89
VPS13C-202ENST00000261517 RITA1Q96K30 269 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 A0A0U1RRA0 63 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 KALRNO60229 2985 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-202ENST00000261517 IGKV2-29A2NJV5 120 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-202ENST00000261517 IGHV3-30-3P0DP02 117 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 COL27A1Q8IZC6 1860 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-202ENST00000261517 C7orf33Q8WU49 177 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 ZNF702PQ9H963 129 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 RPL39LQ96EH5 51 aaKnown RBP3.23□□□□□ -1.89
VPS13C-202ENST00000261517 TMEM223A0PJW6 202 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 CFAP126Q5VTH2 177 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 COL12A1Q99715 3063 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 Q8N976 141 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 SPRNQ5BIV9 151 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 Q8IZM0 81 aa3.23□□□□□ -1.89
VPS13C-202ENST00000261517 MSMPQ1L6U9 139 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 ETDBQ3ZM63 59 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 REG3AQ06141 175 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 HAMPP81172 84 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 DAND5Q8N907 189 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 PPDPFQ9H3Y8 114 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 Q6ZSV7 163 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 KLK9Q2XQG4 91 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 MUSTN1Q8IVN3 82 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 USP34Q70CQ2 3546 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 IGKV2D-26A0A0A0MRZ7 120 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 A0A0J9YXV3 536 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.22□□□□□ -1.89
VPS13C-202ENST00000261517 Q8N2B8 174 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 NDUFC2O95298 119 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 PLA2G2AP14555 144 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 BRWD1-AS2P59051 145 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 UNQ9165/PRO28630Q6UXU0 137 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 APRG1Q8IVJ8 170 aa3.22□□□□□ -1.89
VPS13C-202ENST00000261517 M0R378 163 aa3.21□□□□□ -1.89
VPS13C-202ENST00000261517 NPC2P61916 151 aa3.21□□□□□ -1.89
VPS13C-202ENST00000261517 A0A1B0GUV1 79 aa3.21□□□□□ -1.89
VPS13C-202ENST00000261517 IGHV3-38A0A0C4DH36 116 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 GATA1P15976 413 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-202ENST00000261517 DCANP1Q8TF63 244 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 LOC107984640A0A0U1RRK4 108 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 CRYGDP07320 174 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 H3BNG1 76 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 IGLV2-11P01706 119 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 DEFB136Q30KP8 78 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 YPEL4Q96NS1 127 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 IGLV4-69A0A075B6H9 119 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 NBEAQ8NFP9 2946 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 BEAN1Q3B7T3 259 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 SPTBN5Q9NRC6 3674 aaKnown RBP3.21□□□□□ -1.9
VPS13C-202ENST00000261517 DEFB131BA0A096LNP1 70 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 DEFB135Q30KP9 77 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 ZNF295-AS1Q8N0V1 137 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 IGLV4-3A0A075B6K6 122 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 UPK3BQ9BT76 320 aa3.21□□□□□ -1.9
VPS13C-202ENST00000261517 SPEGQ15772 3267 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms