RNA–Protein interactions for RNA: ENST00000256151.7

CCDC59-201, Transcript of coiled-coil domain containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC59, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-201ENST00000256151 B5MCH6 92 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 Q96MF0 132 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 SYNJ2BPP57105 145 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 TMEM95Q3KNT9 176 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
CCDC59-201ENST00000256151 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
CCDC59-201ENST00000256151 PROK1P58294 105 aa11.75□□□□□ -0.53
CCDC59-201ENST00000256151 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
CCDC59-201ENST00000256151 SS18L2Q9UHA2 77 aa11.75□□□□□ -0.53
CCDC59-201ENST00000256151 AVPP01185 164 aa11.74□□□□□ -0.53
CCDC59-201ENST00000256151 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
CCDC59-201ENST00000256151 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
CCDC59-201ENST00000256151 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
CCDC59-201ENST00000256151 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
CCDC59-201ENST00000256151 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
CCDC59-201ENST00000256151 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
CCDC59-201ENST00000256151 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
CCDC59-201ENST00000256151 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
CCDC59-201ENST00000256151 DUX3Q96PT4 197 aa11.73□□□□□ -0.53
CCDC59-201ENST00000256151 RS1O15537 224 aa11.72□□□□□ -0.53
CCDC59-201ENST00000256151 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
CCDC59-201ENST00000256151 HERVK_113P63121 156 aa11.72□□□□□ -0.53
CCDC59-201ENST00000256151 WFDC11Q8NEX6 87 aa11.72□□□□□ -0.53
CCDC59-201ENST00000256151 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC59-201ENST00000256151 COX7A2LO14548 114 aa11.72□□□□□ -0.53
CCDC59-201ENST00000256151 CITED2Q99967 270 aaPredicted RBP11.72□□□□□ -0.53
CCDC59-201ENST00000256151 ITPR3Q14573 2671 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
CCDC59-201ENST00000256151 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
CCDC59-201ENST00000256151 CCDC179H3BU77 68 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 IGHV4-59P01825 116 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
CCDC59-201ENST00000256151 C10orf99Q6UWK7 81 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 Q6ZSN1 163 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 CR1P17927 2039 aa11.71□□□□□ -0.53
CCDC59-201ENST00000256151 TEX15Q9BXT5 2789 aa11.71□□□□□ -0.54
CCDC59-201ENST00000256151 KNCNA6PVL3 124 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 DEFB112Q30KQ8 113 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 BAHCC1Q9P281 2608 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 A8MZ25 164 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 DEFB131AP59861 70 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 SHISA2Q6UWI4 295 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 C11orf72Q8NBR9 251 aa11.7□□□□□ -0.54
CCDC59-201ENST00000256151 Q6ZSV7 163 aa11.69□□□□□ -0.54
CCDC59-201ENST00000256151 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
CCDC59-201ENST00000256151 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 RBMY1BA6NDE4 496 aaKnown RBP11.68□□□□□ -0.54
CCDC59-201ENST00000256151 RBMY1EA6NEQ0 496 aaKnown RBP11.68□□□□□ -0.54
CCDC59-201ENST00000256151 J3QLI3 93 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 TRACP01848 142 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 RBMY1DP0C7P1 496 aaKnown RBP11.68□□□□□ -0.54
CCDC59-201ENST00000256151 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 NPC2P61916 151 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 NACAE9PAV3 2078 aa11.68□□□□□ -0.54
CCDC59-201ENST00000256151 DGAT2L7PQ6IED9 249 aa11.67□□□□□ -0.54
CCDC59-201ENST00000256151 HERV-K104P63124 156 aa11.67□□□□□ -0.54
CCDC59-201ENST00000256151 Q9UF83 564 aa11.67□□□□□ -0.54
CCDC59-201ENST00000256151 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
CCDC59-201ENST00000256151 HTN1P15515 57 aa11.66□□□□□ -0.54
CCDC59-201ENST00000256151 LINC00242Q5T6M2 205 aa11.66□□□□□ -0.54
CCDC59-201ENST00000256151 Q9H8V8 135 aa11.66□□□□□ -0.54
CCDC59-201ENST00000256151 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
CCDC59-201ENST00000256151 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
CCDC59-201ENST00000256151 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.65□□□□□ -0.54
CCDC59-201ENST00000256151 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
CCDC59-201ENST00000256151 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.54
CCDC59-201ENST00000256151 INSP01308 110 aa11.65□□□□□ -0.55
CCDC59-201ENST00000256151 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.55
CCDC59-201ENST00000256151 LINC01587Q99440 93 aa11.65□□□□□ -0.55
CCDC59-201ENST00000256151 ZNF702PQ9H963 129 aa11.65□□□□□ -0.55
CCDC59-201ENST00000256151 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.55
CCDC59-201ENST00000256151 COX6A2Q02221 97 aa11.64□□□□□ -0.55
CCDC59-201ENST00000256151 PEMTQ9UBM1 199 aa11.64□□□□□ -0.55
CCDC59-201ENST00000256151 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 PF4P02776 101 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 LINC00643Q86TS7 51 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
CCDC59-201ENST00000256151 TMEM126AQ9H061 195 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 SMIM1B2RUZ4 78 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 DAND5Q8N907 189 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 FAM110AQ9BQ89 295 aa11.63□□□□□ -0.55
CCDC59-201ENST00000256151 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
CCDC59-201ENST00000256151 ATP5G1P05496 136 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 Q6YL49 198 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 MAP6D1Q9H9H5 199 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 TLN2Q9Y4G6 2542 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
CCDC59-201ENST00000256151 MEIG1Q5JSS6 88 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 DAZ4Q86SG3 579 aaKnown RBP11.61□□□□□ -0.55
CCDC59-201ENST00000256151 IL17DQ8TAD2 202 aa11.61□□□□□ -0.55
CCDC59-201ENST00000256151 DAZ3Q9NR90 486 aaKnown RBP11.61□□□□□ -0.55
CCDC59-201ENST00000256151 CXCL5P42830 114 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms