RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 BBC3Q96PG8 261 aaPredicted RBP7.39□□□□□ -1.23
COPB1-201ENST00000249923 NDUFA12Q9UI09 145 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 SNRPD3P62318 126 aaKnown RBP7.39□□□□□ -1.23
COPB1-201ENST00000249923 Q6YL49 198 aa7.39□□□□□ -1.23
COPB1-201ENST00000249923 TMEM141Q96I45 108 aa7.38□□□□□ -1.23
COPB1-201ENST00000249923 FLNAP21333 2647 aaKnown RBP7.38□□□□□ -1.23
COPB1-201ENST00000249923 TMEM89A2RUT3 159 aa7.38□□□□□ -1.23
COPB1-201ENST00000249923 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
COPB1-201ENST00000249923 PDZD2O15018 2839 aa7.38□□□□□ -1.23
COPB1-201ENST00000249923 IGHV4-31P0DP07 118 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 C20orf203Q8NBC4 194 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 UBE2E2Q96LR5 201 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 TRIAP1O43715 76 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 OR13C6PQ8NH95 151 aa7.37□□□□□ -1.23
COPB1-201ENST00000249923 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
COPB1-201ENST00000249923 UBE2D3P61077 147 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 UBE2D2P62837 147 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 A8MTW9 85 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
COPB1-201ENST00000249923 DSCR9P59020 149 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 DEFB131AP59861 70 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 TMEM61Q8N0U2 210 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.35□□□□□ -1.23
COPB1-201ENST00000249923 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 RHOHQ15669 191 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 SHISA2Q6UWI4 295 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 LINC01587Q99440 93 aa7.35□□□□□ -1.23
COPB1-201ENST00000249923 I3L3M4 83 aa7.34□□□□□ -1.23
COPB1-201ENST00000249923 KRTAP1-3Q8IUG1 177 aa7.34□□□□□ -1.23
COPB1-201ENST00000249923 J3QLI3 93 aa7.34□□□□□ -1.23
COPB1-201ENST00000249923 RHODO00212 210 aa7.34□□□□□ -1.23
COPB1-201ENST00000249923 C11orf72Q8NBR9 251 aa7.34□□□□□ -1.23
COPB1-201ENST00000249923 ITPR2Q14571 2701 aa7.34□□□□□ -1.24
COPB1-201ENST00000249923 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 ICOSQ9Y6W8 199 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 A0A0J9YXY3 114 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 CIRBPQ14011 172 aaKnown RBP7.33□□□□□ -1.24
COPB1-201ENST00000249923 LITAFQ99732 161 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 Q9HAA7 133 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 TRGV11A0A075B6L2 103 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 A0A1W2PRX2 142 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 Q8N2B8 174 aa7.33□□□□□ -1.24
COPB1-201ENST00000249923 PRIMA1Q86XR5 153 aa7.32□□□□□ -1.24
COPB1-201ENST00000249923 CHCHD7Q9BUK0 85 aa7.32□□□□□ -1.24
COPB1-201ENST00000249923 VWFP04275 2813 aa7.32□□□□□ -1.24
COPB1-201ENST00000249923 ATP6V0E2Q8NHE4 81 aa7.32□□□□□ -1.24
COPB1-201ENST00000249923 MAP6D1Q9H9H5 199 aa7.32□□□□□ -1.24
COPB1-201ENST00000249923 LEPROTO15243 131 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 ADAMTSL4-AS1Q5T5F5 129 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 Q9H8V8 135 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 XCL2Q9UBD3 114 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 NDUFA7O95182 113 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.31□□□□□ -1.24
COPB1-201ENST00000249923 DNAL4O96015 105 aa7.31□□□□□ -1.24
COPB1-201ENST00000249923 IGKV3D-7A0A0C4DH55 119 aa7.3□□□□□ -1.24
COPB1-201ENST00000249923 TINCRA0A1B0GVN0 87 aa7.3□□□□□ -1.24
COPB1-201ENST00000249923 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
COPB1-201ENST00000249923 TMEM263Q8WUH6 116 aaKnown RBP7.3□□□□□ -1.24
COPB1-201ENST00000249923 CITED1Q99966 193 aa7.3□□□□□ -1.24
COPB1-201ENST00000249923 PFN2P35080 140 aa7.3□□□□□ -1.24
COPB1-201ENST00000249923 KLK5Q9Y337 293 aaPredicted RBP7.3□□□□□ -1.24
COPB1-201ENST00000249923 HIST1H4AP62805 103 aaKnown RBP7.29□□□□□ -1.24
COPB1-201ENST00000249923 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 CDKN2A-AS1Q9UH64 79 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 UBE2D4Q9Y2X8 147 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 TRGV1A0A0A0MS02 117 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 DYNLRB2Q8TF09 96 aa7.29□□□□□ -1.24
COPB1-201ENST00000249923 DEFB114Q30KQ6 69 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 ODF3L2Q3SX64 289 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 C4orf3Q8WVX3 66 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 H7C423 109 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 LINC00158P58513 81 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
COPB1-201ENST00000249923 ZNF843Q8N446 348 aa7.27□□□□□ -1.25
COPB1-201ENST00000249923 Q96MF0 132 aa7.27□□□□□ -1.25
COPB1-201ENST00000249923 ATP5G1P05496 136 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 DEFB113Q30KQ7 82 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 UBE2L6O14933 153 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 BAALC-AS2P0C853 105 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 BEAN1Q3B7T3 259 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 C1orf158Q8N1D5 194 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 ESM1Q9NQ30 184 aa7.26□□□□□ -1.25
COPB1-201ENST00000249923 NHLRC4P0CG21 123 aaPredicted RBP7.25□□□□□ -1.25
COPB1-201ENST00000249923 LOC107984640A0A0U1RRK4 108 aa7.25□□□□□ -1.25
COPB1-201ENST00000249923 PAX4O43316 350 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms