RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GAGE6Q13070 117 aa12.3□□□□□ -0.44
SGPP1-201ENST00000247225 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
SGPP1-201ENST00000247225 H3BUA1 57 aa12.3□□□□□ -0.44
SGPP1-201ENST00000247225 IFITM1P13164 125 aa12.3□□□□□ -0.44
SGPP1-201ENST00000247225 NDUFV3P56181 108 aaKnown RBP12.3□□□□□ -0.44
SGPP1-201ENST00000247225 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 GAGE12JA6NER3 117 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 GAGE4Q13068 117 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 KLK9Q2XQG4 91 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 PRIMA1Q86XR5 153 aa12.29□□□□□ -0.44
SGPP1-201ENST00000247225 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
SGPP1-201ENST00000247225 TRBV7-9A0A0J9YWB2 115 aa12.28□□□□□ -0.44
SGPP1-201ENST00000247225 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
SGPP1-201ENST00000247225 RBMY1BA6NDE4 496 aaKnown RBP12.27□□□□□ -0.44
SGPP1-201ENST00000247225 RBMY1EA6NEQ0 496 aaKnown RBP12.27□□□□□ -0.44
SGPP1-201ENST00000247225 RBMY1DP0C7P1 496 aaKnown RBP12.27□□□□□ -0.44
SGPP1-201ENST00000247225 CIRBPQ14011 172 aaKnown RBP12.27□□□□□ -0.45
SGPP1-201ENST00000247225 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.45
SGPP1-201ENST00000247225 MIAQ16674 131 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 GCN1Q92616 2671 aaKnown RBP12.26□□□□□ -0.45
SGPP1-201ENST00000247225 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 Q9HAA7 133 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 GAGE7O76087 117 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 GAGE12FP0CL80 117 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 GAGE12GP0CL81 117 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 GAGE12IP0CL82 117 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 SMIM20Q8N5G0 67 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
SGPP1-201ENST00000247225 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
SGPP1-201ENST00000247225 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
SGPP1-201ENST00000247225 LITAFQ99732 161 aa12.25□□□□□ -0.45
SGPP1-201ENST00000247225 NHLRC4P0CG21 123 aaPredicted RBP12.24□□□□□ -0.45
SGPP1-201ENST00000247225 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
SGPP1-201ENST00000247225 CHCHD7Q9BUK0 85 aa12.24□□□□□ -0.45
SGPP1-201ENST00000247225 Q8N2B8 174 aa12.24□□□□□ -0.45
SGPP1-201ENST00000247225 TRBV30A0A0K0K1B3 111 aa12.23□□□□□ -0.45
SGPP1-201ENST00000247225 FAM104AQ969W3 186 aa12.23□□□□□ -0.45
SGPP1-201ENST00000247225 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
SGPP1-201ENST00000247225 PRB1P04280 392 aa12.22□□□□□ -0.45
SGPP1-201ENST00000247225 CITED1Q99966 193 aa12.21□□□□□ -0.45
SGPP1-201ENST00000247225 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.46
SGPP1-201ENST00000247225 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
SGPP1-201ENST00000247225 Q6ZTI0 123 aa12.2□□□□□ -0.46
SGPP1-201ENST00000247225 PFN2P35080 140 aa12.2□□□□□ -0.46
SGPP1-201ENST00000247225 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 STHQ8IWL8 128 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 YAE1D1Q9NRH1 226 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 GAGE2AQ6NT46 116 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 LINC00308Q8TCZ7 52 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 UBE2L6O14933 153 aa12.19□□□□□ -0.46
SGPP1-201ENST00000247225 NOP10Q9NPE3 64 aaKnown RBP12.19□□□□□ -0.46
SGPP1-201ENST00000247225 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
SGPP1-201ENST00000247225 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
SGPP1-201ENST00000247225 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
SGPP1-201ENST00000247225 WFDC10AQ9H1F0 79 aa12.18□□□□□ -0.46
SGPP1-201ENST00000247225 FAM236AA0A1B0GUQ0 79 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 FAM236BA0A1B0GV22 79 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 SPANXA1Q9NS26 97 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 RNASE1P07998 156 aaKnown RBP12.17□□□□□ -0.46
SGPP1-201ENST00000247225 LINC00158P58513 81 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
SGPP1-201ENST00000247225 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 LST1O00453 97 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 BAALC-AS2P0C853 105 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
SGPP1-201ENST00000247225 INSP01308 110 aa12.16□□□□□ -0.46
SGPP1-201ENST00000247225 ATP5G1P05496 136 aa12.16□□□□□ -0.46
SGPP1-201ENST00000247225 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
SGPP1-201ENST00000247225 SOSTDC1Q6X4U4 206 aa12.16□□□□□ -0.46
SGPP1-201ENST00000247225 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SGPP1-201ENST00000247225 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
SGPP1-201ENST00000247225 CLPSL2Q6UWE3 100 aa12.15□□□□□ -0.46
SGPP1-201ENST00000247225 DAZ4Q86SG3 579 aaKnown RBP12.15□□□□□ -0.46
SGPP1-201ENST00000247225 DAZ3Q9NR90 486 aaKnown RBP12.15□□□□□ -0.46
SGPP1-201ENST00000247225 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
SGPP1-201ENST00000247225 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
SGPP1-201ENST00000247225 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
SGPP1-201ENST00000247225 C5orf38Q86SI9 138 aa12.14□□□□□ -0.47
SGPP1-201ENST00000247225 A0A096LPF7 62 aa12.14□□□□□ -0.47
SGPP1-201ENST00000247225 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
SGPP1-201ENST00000247225 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
SGPP1-201ENST00000247225 ITPR3Q14573 2671 aa12.12□□□□□ -0.47
SGPP1-201ENST00000247225 H3BT86 120 aa12.12□□□□□ -0.47
SGPP1-201ENST00000247225 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
SGPP1-201ENST00000247225 BRI3O95415 125 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 TMEM89A2RUT3 159 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 KRTAP10-9P60411 292 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 SLPIP03973 132 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 HERVK_113P63121 156 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 HERV-K104P63124 156 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
SGPP1-201ENST00000247225 FAM218AQ96MZ4 157 aa12.1□□□□□ -0.47
SGPP1-201ENST00000247225 NDUFA1O15239 70 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 PAX4O43316 350 aa12.09□□□□□ -0.47
SGPP1-201ENST00000247225 DEFB130BP0DP73 79 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms