RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ADAMTSL4-AS1Q5T5F5 129 aa14.65□□□□□ -0.06
HOXC13-201ENST00000243056 IGHV3-35A0A0C4DH35 117 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 FN1P02751 2386 aaKnown RBP14.64□□□□□ -0.07
HOXC13-201ENST00000243056 PEMTQ9UBM1 199 aa14.64□□□□□ -0.07
HOXC13-201ENST00000243056 NSD1Q96L73 2696 aaPredicted RBP14.64□□□□□ -0.07
HOXC13-201ENST00000243056 CYSRT1A8MQ03 144 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 C10orf99Q6UWK7 81 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 HIST2H2BDQ6DRA6 164 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 Q6YL49 198 aa14.63□□□□□ -0.07
HOXC13-201ENST00000243056 F8P00451 2351 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 TRAV13-1A0A0B4J241 112 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 RPL18AQ02543 176 aaKnown RBP14.62□□□□□ -0.07
HOXC13-201ENST00000243056 F8WDY8 70 aa14.62□□□□□ -0.07
HOXC13-201ENST00000243056 IGLV11-55A0A075B6I3 123 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 IGF1P05019 195 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 IGHV3-66A0A0C4DH42 116 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 LY6G6DO95868 133 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 ZFAND3Q9H8U3 227 aa14.61□□□□□ -0.07
HOXC13-201ENST00000243056 JMJD1CQ15652 2540 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 RS1O15537 224 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 TMEM61Q8N0U2 210 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 TRAV12-3A0A0B4J271 114 aa14.6□□□□□ -0.07
HOXC13-201ENST00000243056 POLR2KP53803 58 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ2Q13117 558 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ4Q86SG3 579 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ1Q9NQZ3 744 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 DAZ3Q9NR90 486 aaKnown RBP14.6□□□□□ -0.07
HOXC13-201ENST00000243056 MALP21145 153 aa14.59□□□□□ -0.07
HOXC13-201ENST00000243056 CTSGP08311 255 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 C9orf139Q6ZV77 190 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 SERP2Q8N6R1 65 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 PHLDA3Q9Y5J5 127 aa14.58□□□□□ -0.07
HOXC13-201ENST00000243056 A0A0J9YXV3 536 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 ESM1Q9NQ30 184 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 PPP1R17O96001 155 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 IGHG2P01859 326 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-30-3P0DP02 117 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 S100A4P26447 101 aaKnown RBP14.57□□□□□ -0.08
HOXC13-201ENST00000243056 TIRAPP58753 221 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 C15orf32Q32M92 178 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 PRO0628Q9UI54 55 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 C22orf24Q9Y442 160 aa14.57□□□□□ -0.08
HOXC13-201ENST00000243056 MIAQ16674 131 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 LINC00315P59091 139 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 LINC00336Q6ZUF6 198 aa14.56□□□□□ -0.08
HOXC13-201ENST00000243056 C9orf47Q6ZRZ4 202 aa14.55□□□□□ -0.08
HOXC13-201ENST00000243056 FAM110DQ8TAY7 271 aaPredicted RBP14.55□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV3-11P01762 117 aa14.54□□□□□ -0.08
HOXC13-201ENST00000243056 BUB3O43684 328 aa14.54□□□□□ -0.08
HOXC13-201ENST00000243056 VCYO14598 125 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 PFN2P35080 140 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 C19orf54Q5BKX5 351 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 KIF25-AS1Q9Y6Z4 181 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 IGHV4OR15-8A0A075B7B6 117 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 A0A087WVE0 104 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 A0A087WW49 117 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 DAND5Q8N907 189 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 C1orf43Q9BWL3 253 aa14.53□□□□□ -0.08
HOXC13-201ENST00000243056 TINCRA0A1B0GVN0 87 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 DNAJC9-AS1A6NH13 148 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 INAFM1C9JVW0 142 aa14.52□□□□□ -0.08
HOXC13-201ENST00000243056 TRBV12-3P01733 135 aa14.52□□□□□ -0.09
HOXC13-201ENST00000243056 CLEC19AQ6UXS0 136 aa14.52□□□□□ -0.09
HOXC13-201ENST00000243056 CLPSL1A2RUU4 121 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 FHL2Q14192 279 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 ZNF702PQ9H963 129 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 IGKV3D-7A0A0C4DH55 119 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 RPL35AP18077 110 aaKnown RBP14.51□□□□□ -0.09
HOXC13-201ENST00000243056 BEAN1Q3B7T3 259 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 CCDC140Q96MF4 163 aa14.51□□□□□ -0.09
HOXC13-201ENST00000243056 GNRH2O43555 120 aa14.5□□□□□ -0.09
HOXC13-201ENST00000243056 IGHV3-49A0A0A0MS15 119 aa14.5□□□□□ -0.09
HOXC13-201ENST00000243056 RNASE3P12724 160 aaKnown RBP14.5□□□□□ -0.09
HOXC13-201ENST00000243056 MAST4O15021 2626 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 A8MZ25 164 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 SYNJ2BPP57105 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 NDUFA12Q9UI09 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 COX7A2LO14548 114 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 ZFAND2AQ8N6M9 145 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 PKIGQ9Y2B9 76 aa14.49□□□□□ -0.09
HOXC13-201ENST00000243056 BAALC-AS2P0C853 105 aa14.48□□□□□ -0.09
HOXC13-201ENST00000243056 TRBV27A0A0K0K1C4 114 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 LINC01561Q8N1V8 128 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 MUC4Q99102 2169 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 NXPH4O95158 308 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 C2CD3Q4AC94 2353 aa14.47□□□□□ -0.09
HOXC13-201ENST00000243056 A0A087WWL8 130 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 USP17L23D6RBM5 183 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 MRPL53Q96EL3 112 aaKnown RBP14.46□□□□□ -0.09
HOXC13-201ENST00000243056 C11orf44Q8N8P7 122 aa14.46□□□□□ -0.09
HOXC13-201ENST00000243056 IGLV4-3A0A075B6K6 122 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 TRAV21A0A0B4J279 112 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 WNK1Q9H4A3 2382 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 CFHR3Q02985 330 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 C20orf173Q96LM9 149 aa14.45□□□□□ -0.1
HOXC13-201ENST00000243056 NACAE9PAV3 2078 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms