RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PRB2P02812 416 aaPredicted RBP16.62■□□□□ 0.25
RRP9-201ENST00000232888 ZNF25P17030 456 aaPredicted RBP16.62■□□□□ 0.25
RRP9-201ENST00000232888 DEFB121Q5J5C9 76 aa16.62■□□□□ 0.25
RRP9-201ENST00000232888 LURAP1LQ8IV03 231 aa16.62■□□□□ 0.25
RRP9-201ENST00000232888 DLEU1O43261 78 aa16.61■□□□□ 0.25
RRP9-201ENST00000232888 C11orf86A6NJI1 115 aa16.6■□□□□ 0.25
RRP9-201ENST00000232888 HNRNPA3P51991 378 aaKnown RBP16.6■□□□□ 0.25
RRP9-201ENST00000232888 TMEM101Q96IK0 257 aa16.6■□□□□ 0.25
RRP9-201ENST00000232888 MRPL23Q16540 153 aaKnown RBP16.6■□□□□ 0.25
RRP9-201ENST00000232888 AMMECR1LQ6DCA0 310 aa16.6■□□□□ 0.25
RRP9-201ENST00000232888 Q6ZUT4 128 aa16.6■□□□□ 0.25
RRP9-201ENST00000232888 OR5A1Q8NGJ0 315 aa16.6■□□□□ 0.25
RRP9-201ENST00000232888 MRPS16Q9Y3D3 137 aaKnown RBP16.6■□□□□ 0.25
RRP9-201ENST00000232888 H3BNG1 76 aa16.59■□□□□ 0.25
RRP9-201ENST00000232888 A0A0J9YWU9 116 aa16.58■□□□□ 0.24
RRP9-201ENST00000232888 A0A0J9YY99 117 aa16.58■□□□□ 0.24
RRP9-201ENST00000232888 HERVK_113P61574 105 aa16.58■□□□□ 0.24
RRP9-201ENST00000232888 BOD1L2Q8IYS8 172 aa16.58■□□□□ 0.24
RRP9-201ENST00000232888 HTN3P15516 51 aa16.57■□□□□ 0.24
RRP9-201ENST00000232888 NMUP48645 174 aa16.57■□□□□ 0.24
RRP9-201ENST00000232888 ICOSQ9Y6W8 199 aa16.57■□□□□ 0.24
RRP9-201ENST00000232888 E9PLD3 99 aa16.56■□□□□ 0.24
RRP9-201ENST00000232888 CHAC1Q9BUX1 264 aa16.56■□□□□ 0.24
RRP9-201ENST00000232888 CDC42SE2Q9NRR3 84 aa16.56■□□□□ 0.24
RRP9-201ENST00000232888 CHCHD5Q9BSY4 110 aa16.55■□□□□ 0.24
RRP9-201ENST00000232888 A0A0J9YXV3 536 aa16.55■□□□□ 0.24
RRP9-201ENST00000232888 TINCRA0A1B0GVN0 87 aa16.55■□□□□ 0.24
RRP9-201ENST00000232888 IGKV2D-26A0A0A0MRZ7 120 aa16.54■□□□□ 0.24
RRP9-201ENST00000232888 SIVA1O15304 175 aa16.54■□□□□ 0.24
RRP9-201ENST00000232888 SEC11AP67812 179 aa16.54■□□□□ 0.24
RRP9-201ENST00000232888 TMEM170BQ5T4T1 132 aa16.54■□□□□ 0.24
RRP9-201ENST00000232888 C11orf45Q8TAV5 145 aa16.54■□□□□ 0.24
RRP9-201ENST00000232888 UBE2D1P51668 147 aa16.53■□□□□ 0.24
RRP9-201ENST00000232888 FAM19A3Q7Z5A8 133 aa16.53■□□□□ 0.24
RRP9-201ENST00000232888 NOTCH1P46531 2555 aa16.53■□□□□ 0.24
RRP9-201ENST00000232888 CTAG1AP78358 180 aa16.52■□□□□ 0.24
RRP9-201ENST00000232888 TIRAPP58753 221 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 GAGE6Q13070 117 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 RNASE13Q5GAN3 156 aaKnown RBP16.51■□□□□ 0.23
RRP9-201ENST00000232888 Q6ZTC4 211 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 PCP2Q8IVA1 136 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 ZNF22P17026 224 aaPredicted RBP16.51■□□□□ 0.23
RRP9-201ENST00000232888 TCTAP57738 103 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 MRAPQ8TCY5 172 aa16.51■□□□□ 0.23
RRP9-201ENST00000232888 A0A1B0GUV1 79 aa16.5■□□□□ 0.23
RRP9-201ENST00000232888 M0R143 59 aa16.5■□□□□ 0.23
RRP9-201ENST00000232888 KRTAP21-3Q3LHN1 58 aa16.5■□□□□ 0.23
RRP9-201ENST00000232888 A0A096LPF7 62 aa16.49■□□□□ 0.23
RRP9-201ENST00000232888 TMEM223A0PJW6 202 aa16.49■□□□□ 0.23
RRP9-201ENST00000232888 MGAM2Q2M2H8 2515 aa16.49■□□□□ 0.23
RRP9-201ENST00000232888 NBEAL1Q6ZS30 2694 aa16.48■□□□□ 0.23
RRP9-201ENST00000232888 GEMIN7Q9H840 131 aaKnown RBP16.48■□□□□ 0.23
RRP9-201ENST00000232888 HERVK_113P63121 156 aa16.47■□□□□ 0.23
RRP9-201ENST00000232888 LBHQ53QV2 105 aaPredicted RBP16.47■□□□□ 0.23
RRP9-201ENST00000232888 IGLV5-45A0A087WSX0 123 aa16.47■□□□□ 0.23
RRP9-201ENST00000232888 TRAV8-6A0A0B4J262 113 aa16.47■□□□□ 0.23
RRP9-201ENST00000232888 LELP1Q5T871 98 aa16.47■□□□□ 0.23
RRP9-201ENST00000232888 NANOS2P60321 138 aaKnown RBP16.46■□□□□ 0.23
RRP9-201ENST00000232888 C2orf91Q6ZV80 131 aa16.46■□□□□ 0.23
RRP9-201ENST00000232888 HIGD1BQ9P298 99 aa16.46■□□□□ 0.23
RRP9-201ENST00000232888 DEFB131BA0A096LNP1 70 aa16.44■□□□□ 0.22
RRP9-201ENST00000232888 H3BRM9 83 aa16.44■□□□□ 0.22
RRP9-201ENST00000232888 LEPROTO15243 131 aa16.44■□□□□ 0.22
RRP9-201ENST00000232888 TP73-AS1Q9UF72 201 aa16.44■□□□□ 0.22
RRP9-201ENST00000232888 MYMXA0A1B0GTQ4 84 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 TMEM262E9PQX1 116 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 LINC00242Q5T6M2 205 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 PLEKHB2Q96CS7 222 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 B9D2Q9BPU9 175 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 SNHG12Q9BXW3 62 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 IGLV4-60A0A075B6I1 120 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 LINC00469Q8N7U9 141 aa16.43■□□□□ 0.22
RRP9-201ENST00000232888 TRAV13-1A0A0B4J241 112 aa16.42■□□□□ 0.22
RRP9-201ENST00000232888 RBX1P62877 108 aa16.42■□□□□ 0.22
RRP9-201ENST00000232888 MAPKAPK5-AS1Q8N8E1 139 aa16.42■□□□□ 0.22
RRP9-201ENST00000232888 TRAV10A0A0B4J240 114 aa16.41■□□□□ 0.22
RRP9-201ENST00000232888 TTTY13Q9BZ97 58 aa16.41■□□□□ 0.22
RRP9-201ENST00000232888 J3QQQ9 107 aa16.4■□□□□ 0.22
RRP9-201ENST00000232888 LYPD5Q6UWN5 251 aa16.4■□□□□ 0.22
RRP9-201ENST00000232888 CCL25O15444 150 aa16.39■□□□□ 0.21
RRP9-201ENST00000232888 IGHV1-58A0A0C4DH39 117 aa16.38■□□□□ 0.21
RRP9-201ENST00000232888 LGALS3P17931 250 aaKnown RBP16.38■□□□□ 0.21
RRP9-201ENST00000232888 MPV17L2Q567V2 206 aa16.38■□□□□ 0.21
RRP9-201ENST00000232888 ZNF815PA8K554 130 aa16.38■□□□□ 0.21
RRP9-201ENST00000232888 EREGO14944 169 aa16.38■□□□□ 0.21
RRP9-201ENST00000232888 CDKN2A-AS1Q9UH64 79 aa16.38■□□□□ 0.21
RRP9-201ENST00000232888 HSD52Q0P140 79 aa16.37■□□□□ 0.21
RRP9-201ENST00000232888 COX6A2Q02221 97 aa16.36■□□□□ 0.21
RRP9-201ENST00000232888 IGHV3-30-3P0DP02 117 aa16.35■□□□□ 0.21
RRP9-201ENST00000232888 C15orf53Q8NAA6 179 aa16.34■□□□□ 0.21
RRP9-201ENST00000232888 NHLRC4P0CG21 123 aaPredicted RBP16.34■□□□□ 0.21
RRP9-201ENST00000232888 HINT1P49773 126 aaPredicted RBP16.34■□□□□ 0.21
RRP9-201ENST00000232888 TSPEAR-AS2P59090 65 aa16.34■□□□□ 0.21
RRP9-201ENST00000232888 LINC00959A0A1B0GUT2 108 aa16.33■□□□□ 0.2
RRP9-201ENST00000232888 TAL2Q16559 108 aa16.33■□□□□ 0.2
RRP9-201ENST00000232888 TENM3Q9P273 2699 aa16.32■□□□□ 0.2
RRP9-201ENST00000232888 SPINK8P0C7L1 97 aa16.32■□□□□ 0.2
RRP9-201ENST00000232888 SS18Q15532 418 aa16.32■□□□□ 0.2
RRP9-201ENST00000232888 BATFQ16520 125 aa16.32■□□□□ 0.2
RRP9-201ENST00000232888 BVES-AS1Q5T3Y7 98 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms