RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 Q9H8V8 135 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 IGHV3-38A0A0C4DH36 116 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 ATP5J2P56134 94 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 ZNF415Q09FC8 603 aa10.1□□□□□ -0.79
SCNN1A-201ENST00000228916 IGHV3OR16-12A0A075B7B8 117 aa10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 LINC00643Q86TS7 51 aa10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 RBMY1BA6NDE4 496 aaKnown RBP10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 RBMY1EA6NEQ0 496 aaKnown RBP10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 RBMY1DP0C7P1 496 aaKnown RBP10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 Q8N2B8 174 aa10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 TRACP01848 142 aa10.09□□□□□ -0.79
SCNN1A-201ENST00000228916 HERVK_113P63121 156 aa10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 DAZ2Q13117 558 aaKnown RBP10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
SCNN1A-201ENST00000228916 HOXD3P31249 432 aaPredicted RBP10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 DEFB131AP59861 70 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 CREBBPQ92793 2442 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 C11orf72Q8NBR9 251 aa10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
SCNN1A-201ENST00000228916 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
SCNN1A-201ENST00000228916 DGAT2L7PQ6IED9 249 aa10.06□□□□□ -0.8
SCNN1A-201ENST00000228916 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 FAM222AQ5U5X8 452 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 AKAP9Q99996 3911 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 RS1O15537 224 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 BAALC-AS2P0C853 105 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 C3orf56Q8N813 242 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 B4DSR2 109 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
SCNN1A-201ENST00000228916 USP9XQ93008 2570 aaPredicted RBP10.04□□□□□ -0.8
SCNN1A-201ENST00000228916 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
SCNN1A-201ENST00000228916 ATP5G1P05496 136 aa10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 C5orf38Q86SI9 138 aa10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 C3orf22Q8N5N4 141 aa10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 NRGNQ92686 78 aa10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
SCNN1A-201ENST00000228916 CXCL5P42830 114 aa10.02□□□□□ -0.8
SCNN1A-201ENST00000228916 PRIMA1Q86XR5 153 aa10.02□□□□□ -0.8
SCNN1A-201ENST00000228916 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.8
SCNN1A-201ENST00000228916 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
SCNN1A-201ENST00000228916 FBN2P35556 2912 aa10.02□□□□□ -0.81
SCNN1A-201ENST00000228916 F5H768 121 aa10.02□□□□□ -0.81
SCNN1A-201ENST00000228916 UQCRQO14949 82 aa10.02□□□□□ -0.81
SCNN1A-201ENST00000228916 NDUFA7O95182 113 aa10.01□□□□□ -0.81
SCNN1A-201ENST00000228916 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
SCNN1A-201ENST00000228916 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
SCNN1A-201ENST00000228916 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 CENPEQ02224 2701 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 HIST2H2BCQ6DN03 193 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 DOPEY1Q5JWR5 2465 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 DEFB136Q30KP8 78 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
SCNN1A-201ENST00000228916 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 PF4P02776 101 aa9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 POLQO75417 2590 aa9.99□□□□□ -0.81
SCNN1A-201ENST00000228916 SLURP1P55000 103 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 INSP01308 110 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 MALP21145 153 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
SCNN1A-201ENST00000228916 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
SCNN1A-201ENST00000228916 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
SCNN1A-201ENST00000228916 HIST1H4AP62805 103 aaKnown RBP9.97□□□□□ -0.81
SCNN1A-201ENST00000228916 ZNF469Q96JG9 3925 aaPredicted RBP9.97□□□□□ -0.81
SCNN1A-201ENST00000228916 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
SCNN1A-201ENST00000228916 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.81
SCNN1A-201ENST00000228916 Q96MF0 132 aa9.96□□□□□ -0.81
SCNN1A-201ENST00000228916 Q9HAA7 133 aa9.96□□□□□ -0.81
SCNN1A-201ENST00000228916 COX7CP15954 63 aa9.96□□□□□ -0.82
SCNN1A-201ENST00000228916 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
SCNN1A-201ENST00000228916 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
SCNN1A-201ENST00000228916 IGSF10Q6WRI0 2623 aa9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 LINC01356Q8N9X3 169 aa9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
SCNN1A-201ENST00000228916 CRPP02741 224 aa9.94□□□□□ -0.82
SCNN1A-201ENST00000228916 TEX15Q9BXT5 2789 aa9.94□□□□□ -0.82
SCNN1A-201ENST00000228916 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
SCNN1A-201ENST00000228916 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms