RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 NTM-AS1Q6ZSK4 140 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 UBE2D3P61077 147 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 UBE2D2P62837 147 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
HMGXB4-201ENST00000216106 IGLL5B9A064 214 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 CRLF1O75462 422 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 IGHV3-30-3P0DP02 117 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 DAZ4Q86SG3 579 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 OVOL2Q9BRP0 275 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 DAZ3Q9NR90 486 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 TINCRA0A1B0GVN0 87 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 OR5A1Q8NGJ0 315 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 SPINK8P0C7L1 97 aa5.67□□□□□ -1.5
HMGXB4-201ENST00000216106 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 A6NJY4 79 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 A8MZ25 164 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 UBE2D1P51668 147 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 C9orf66Q5T8R8 295 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 IGHV3-30P01768 117 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 IGHV3-30-5P0DP03 117 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 C10orf126Q8N4M7 172 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 GEMIN7Q9H840 131 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 SPANXB1Q9NS25 103 aaPredicted RBP5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 APOMO95445 188 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 DEFB130BP0DP73 79 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 DEFB130AP0DP74 79 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 INSL3P51460 131 aa5.66□□□□□ -1.5
HMGXB4-201ENST00000216106 CDKN2A-AS1Q9UH64 79 aa5.65□□□□□ -1.5
HMGXB4-201ENST00000216106 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
HMGXB4-201ENST00000216106 TRBV6-4A0A1B0GX49 114 aa5.65□□□□□ -1.5
HMGXB4-201ENST00000216106 PGPEP1Q9NXJ5 209 aa5.65□□□□□ -1.5
HMGXB4-201ENST00000216106 FHL2Q14192 279 aa5.65□□□□□ -1.51
HMGXB4-201ENST00000216106 FLNBO75369 2602 aaKnown RBP5.65□□□□□ -1.51
HMGXB4-201ENST00000216106 COX6A2Q02221 97 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 SBSPONQ8IVN8 264 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 CITED1Q99966 193 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 F8P00451 2351 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 TRAV13-1A0A0B4J241 112 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 A0A0J9YXY3 114 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 UBE2L6O14933 153 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 FOSL1P15407 271 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 NDUFA12Q9UI09 145 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 X6R8D5 127 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
HMGXB4-201ENST00000216106 DEFB135Q30KP9 77 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 LINC00242Q5T6M2 205 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 TMEM238C9JI98 176 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 CIDEAO60543 219 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 GTSF1LQ9H1H1 148 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 CSDC2Q9Y534 153 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 TSPAN13O95857 204 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 CFC1BP0CG36 223 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 CFC1P0CG37 223 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 TIRAPP58753 221 aa5.63□□□□□ -1.51
HMGXB4-201ENST00000216106 IGLV5-45A0A087WSX0 123 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 A4D1N5 150 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 H3BMG7 143 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 OCIAD2Q56VL3 154 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 KIR2DL5BQ8NHK3 375 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 DEFB4AO15263 64 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 HERVK_113P63121 156 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 MUSTN1Q8IVN3 82 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 GAGE6Q13070 117 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 TMEM101Q96IK0 257 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 LITAFQ99732 161 aa5.62□□□□□ -1.51
HMGXB4-201ENST00000216106 ZFAND6Q6FIF0 208 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 MTURNQ8N3F0 131 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 FAM222AQ5U5X8 452 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 LINC00612Q8N6U2 182 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 NPC2P61916 151 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 SMAGPQ0VAQ4 97 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
HMGXB4-201ENST00000216106 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 PRSS2P07478 247 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 SMIM9A6NGZ8 99 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 GYPEP15421 78 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 RBX1P62877 108 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 CHCHD5Q9BSY4 110 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 FAM19A3Q7Z5A8 133 aa5.6□□□□□ -1.51
HMGXB4-201ENST00000216106 APOC4P55056 127 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 DAND5Q8N907 189 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 PRO1854Q9UHT4 67 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 A0A096LPF7 62 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 H7C2G1 150 aa5.59□□□□□ -1.51
HMGXB4-201ENST00000216106 H7C423 109 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms