RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ANAPC13Q9BS18 74 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 WFDC10AQ9H1F0 79 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.53□□□□□ -0.88
CTNS-201ENST00000046640 IGKV2-29A2NJV5 120 aaPredicted RBP9.53□□□□□ -0.88
CTNS-201ENST00000046640 IGHV3-30-3P0DP02 117 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 DAND5Q8N907 189 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
CTNS-201ENST00000046640 A0A0J9YXY3 114 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 STHQ8IWL8 128 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 HIVEP2P31629 2446 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 ZNF415Q09FC8 603 aa9.52□□□□□ -0.89
CTNS-201ENST00000046640 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
CTNS-201ENST00000046640 RHOHQ15669 191 aa9.51□□□□□ -0.89
CTNS-201ENST00000046640 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
CTNS-201ENST00000046640 INSP01308 110 aa9.5□□□□□ -0.89
CTNS-201ENST00000046640 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
CTNS-201ENST00000046640 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
CTNS-201ENST00000046640 TEX49A0A1B0GTD5 131 aa9.49□□□□□ -0.89
CTNS-201ENST00000046640 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
CTNS-201ENST00000046640 GCN1Q92616 2671 aaKnown RBP9.49□□□□□ -0.89
CTNS-201ENST00000046640 TRGV1A0A0A0MS02 117 aa9.49□□□□□ -0.89
CTNS-201ENST00000046640 KRTAP1-1Q07627 177 aa9.49□□□□□ -0.89
CTNS-201ENST00000046640 TEX29Q8N6K0 151 aa9.49□□□□□ -0.89
CTNS-201ENST00000046640 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
CTNS-201ENST00000046640 B5MCH6 92 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 TRIAP1O43715 76 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
CTNS-201ENST00000046640 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
CTNS-201ENST00000046640 A8MTW9 85 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 PLA2G2AP14555 144 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 SBSPONQ8IVN8 264 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 TMEM86BQ8N661 226 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 FAM104AQ969W3 186 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 GAGE5Q13069 117 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 GAGE6Q13070 117 aa9.47□□□□□ -0.89
CTNS-201ENST00000046640 LINC01620Q4KN68 170 aa9.46□□□□□ -0.89
CTNS-201ENST00000046640 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.89
CTNS-201ENST00000046640 Q6ZTI0 123 aa9.46□□□□□ -0.9
CTNS-201ENST00000046640 CRLF1O75462 422 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
CTNS-201ENST00000046640 ATXN8Q156A1 80 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
CTNS-201ENST00000046640 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 CITED1Q99966 193 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 CHCHD7Q9BUK0 85 aa9.45□□□□□ -0.9
CTNS-201ENST00000046640 LITAFQ99732 161 aa9.44□□□□□ -0.9
CTNS-201ENST00000046640 NOP10Q9NPE3 64 aaKnown RBP9.44□□□□□ -0.9
CTNS-201ENST00000046640 J3QKU1 62 aa9.44□□□□□ -0.9
CTNS-201ENST00000046640 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
CTNS-201ENST00000046640 VWFP04275 2813 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 NDUFA7O95182 113 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 C2orf82Q6UX34 121 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
CTNS-201ENST00000046640 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
CTNS-201ENST00000046640 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 SNCGO76070 127 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
CTNS-201ENST00000046640 RS1O15537 224 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 TRAV8-4A0A0B4J246 113 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
CTNS-201ENST00000046640 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
CTNS-201ENST00000046640 COX6A2Q02221 97 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 GAGE4Q13068 117 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
CTNS-201ENST00000046640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.41□□□□□ -0.9
CTNS-201ENST00000046640 CCDC179H3BU77 68 aa9.4□□□□□ -0.9
CTNS-201ENST00000046640 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
CTNS-201ENST00000046640 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 GAGE7O76087 117 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 RNASE1P07998 156 aaKnown RBP9.4□□□□□ -0.91
CTNS-201ENST00000046640 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.91
CTNS-201ENST00000046640 GAGE12FP0CL80 117 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 GAGE12GP0CL81 117 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 GAGE12IP0CL82 117 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 TTC32Q5I0X7 151 aa9.4□□□□□ -0.91
CTNS-201ENST00000046640 H7C423 109 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 MIAQ16674 131 aa9.39□□□□□ -0.91
CTNS-201ENST00000046640 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms